Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DESI2
  • Mouse genes Desi2
  • Rat genes Desi2
  • Zfish genes desi2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Desi2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004843	cysteine-type deubiquitinase activity	DESI2	IDA		Human	PMID:28483520
Molecular Function	GO:1990380	K48-linked deubiquitinase activity	DESI2	IMP		Human	PMID:28483520
Molecular Function	GO:0061578	K63-linked deubiquitinase activity	DESI2	IMP		Human	PMID:28483520
Molecular Function	GO:0005515	protein binding	DESI2	IPI	UniProtKB:P62081	Human	PMID:28483520
Molecular Function	GO:0005515	protein binding	DESI2	IPI	UniProtKB:P53367	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DESI2	IPI	UniProtKB:Q12982	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DESI2	IPI	UniProtKB:Q8N0X7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DESI2	IPI	UniProtKB:Q8NI60	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DESI2	IPI	UniProtKB:Q96AL5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DESI2	IPI	UniProtKB:Q99541	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DESI2	IPI	UniProtKB:Q9BT49	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DESI2	IPI	UniProtKB:Q9HB07	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DESI2	IPI	UniProtKB:Q9NS98	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DESI2	IPI	UniProtKB:Q9UMS0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DESI2	IPI	UniProtKB:Q9Y371	Human	PMID:32296183
Cellular Component	GO:0005737	cytoplasm	Desi2	IDA		Mouse	MGI:MGI:5508711|PMID:22370726
Cellular Component	GO:0005737	cytoplasm	Desi2	IDA		Mouse	PMID:21553223
Biological Process	GO:0060027	convergent extension involved in gastrulation	desi2	IGI	ZFIN:ZDB-MRPHLNO-050318-3,ZFIN:ZDB-MRPHLNO-080912-1	Zfish	PMID:18538138
Biological Process	GO:0060027	convergent extension involved in gastrulation	desi2	IMP	ZFIN:ZDB-MRPHLNO-080912-1	Zfish	PMID:18538138

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern