Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DEDD
  • Mouse genes Dedd
  • Rat genes Dedd
  • Zfish genes dedd
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Dedd

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	Dedd	IDA		Mouse	MGI:MGI:1306907|PMID:9774341
Molecular Function	GO:0005515	protein binding	DEDD	IPI	UniProtKB:Q9UNN5	Human	PMID:15688372
Molecular Function	GO:0005515	protein binding	DEDD	IPI	UniProtKB:Q06481	Human	PMID:20195357
Molecular Function	GO:0005515	protein binding	Dedd	IPI	PR:P30282	Mouse	PMID:21135503
Molecular Function	GO:0005515	protein binding	Dedd	IPI	UniProtKB:Q13158	Mouse	PMID:9774341
Molecular Function	GO:0005515	protein binding	Dedd	IPI	PR:Q64261	Mouse	PMID:21135503
Molecular Function	GO:0005515	protein binding	Dedd	IPI	UniProtKB:Q14790	Mouse	PMID:9774341
Molecular Function	GO:0005515	protein binding	Dedd	IPI	PR:P30285	Mouse	PMID:21135503
Cellular Component	GO:0005737	cytoplasm	Dedd	IDA		Mouse	MGI:MGI:1306907|PMID:9774341
Cellular Component	GO:0005730	nucleolus	Dedd	IDA		Mouse	MGI:MGI:1306907|PMID:9774341
Biological Process	GO:0046697	decidualization	Dedd	IMP	MGI:MGI:3707325	Mouse	PMID:21135503
Biological Process	GO:0008625	extrinsic apoptotic signaling pathway via death domain receptors	Dedd	IDA		Mouse	PMID:9774341
Biological Process	GO:0042177	negative regulation of protein catabolic process	Dedd	IMP	MGI:MGI:3707325	Mouse	PMID:21135503
Biological Process	GO:1901837	negative regulation of transcription of nucleolar large rRNA by RNA polymerase I	Dedd	IDA		Mouse	PMID:9774341
Biological Process	GO:0007283	spermatogenesis	Dedd	IEP		Rat	PMID:9832420|RGD:632570

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern