Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CPLANE2
  • Mouse genes Cplane2
  • Rat genes Cplane2
  • Zfish genes cplane2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cplane2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003924	GTPase activity	Cplane2	IMP		Mouse	PMID:29038301
Molecular Function	GO:0005515	protein binding	CPLANE2	IPI	UniProtKB:Q9BT04	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	CPLANE2	IPI	UniProtKB:P12268	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CPLANE2	IPI	UniProtKB:P12268	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CPLANE2	IPI	UniProtKB:P61587	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CPLANE2	IPI	UniProtKB:Q9BT04	Human	PMID:32296183
Cellular Component	GO:0005814	centriole	Cplane2	IDA		Mouse	PMID:29038301
Cellular Component	GO:0097546	ciliary base	Cplane2	IDA		Mouse	PMID:29038301
Cellular Component	GO:0035869	ciliary transition zone	Cplane2	IDA		Mouse	PMID:29038301
Biological Process	GO:0035082	axoneme assembly	Cplane2	IMP	MGI:6887372	Mouse	PMID:29038301
Biological Process	GO:0060271	cilium assembly	Cplane2	IMP		Mouse	PMID:29038301
Biological Process	GO:0060271	cilium assembly	Cplane2	IMP	MGI:6887373	Mouse	PMID:29038301
Biological Process	GO:0060271	cilium assembly	Cplane2	IDA		Mouse	PMID:29038301
Biological Process	GO:0060271	cilium assembly	Cplane2	IMP	MGI:6887372	Mouse	PMID:29038301
Biological Process	GO:1904888	cranial skeletal system development	Cplane2	IMP	MGI:6887373	Mouse	PMID:29038301
Biological Process	GO:0003274	endocardial cushion fusion	Cplane2	IMP	MGI:6887373	Mouse	PMID:29038301
Biological Process	GO:0060173	limb development	Cplane2	IMP	MGI:6887372	Mouse	PMID:29038301
Biological Process	GO:0060173	limb development	Cplane2	IMP	MGI:6887373	Mouse	PMID:29038301
Biological Process	GO:0016485	protein processing	Cplane2	IMP	MGI:6887373	Mouse	PMID:29038301
Biological Process	GO:1901620	regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning	Cplane2	IMP	MGI:6887372	Mouse	PMID:29038301
Biological Process	GO:1901620	regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning	Cplane2	IMP	MGI:6887373	Mouse	PMID:29038301
Biological Process	GO:0007224	smoothened signaling pathway	Cplane2	IMP	MGI:6887372	Mouse	PMID:29038301
Biological Process	GO:0007224	smoothened signaling pathway	Cplane2	IMP	MGI:6887373	Mouse	PMID:29038301

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern