Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes COLQ
  • Mouse genes Colq
  • Rat genes Colq
  • Zfish genes colq,wu:fc38h03
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Colq

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008201	heparin binding	Colq	IDA		Rat	PMID:12684510|RGD:728369
Molecular Function	GO:0005515	protein binding	COLQ	IPI	UniProtKB:P22303	Human	PMID:15526038
Molecular Function	GO:0005515	protein binding	COLQ	IPI	UniProtKB:Q96EQ0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Colq	IPI	PR:P21836	Mouse	PMID:20053883
Molecular Function	GO:0005515	protein binding	Colq	IPI	PR:Q61006	Mouse	PMID:20053883
Cellular Component	GO:0030054	cell junction	COLQ	IDA		Human	GO_REF:0000052
Cellular Component	GO:0062023	collagen-containing extracellular matrix	COLQ	HDA		Human	PMID:25037231
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Colq	HDA		Mouse	MGI:MGI:6201834|PMID:22159717
Cellular Component	GO:0031594	neuromuscular junction	Colq	IDA		Mouse	PMID:20053883
Cellular Component	GO:0005886	plasma membrane	COLQ	IDA		Human	GO_REF:0000052
Biological Process	GO:0090150	establishment of protein localization to membrane	Colq	IMP	MGI:MGI:1857733	Mouse	PMID:20053883
Biological Process	GO:0008582	regulation of synaptic assembly at neuromuscular junction	Colq	IMP	MGI:MGI:1857733	Mouse	PMID:20053883
Biological Process	GO:0071340	skeletal muscle acetylcholine-gated channel clustering	Colq	IDA		Mouse	PMID:20053883
Biological Process	GO:0071340	skeletal muscle acetylcholine-gated channel clustering	Colq	IMP	MGI:MGI:1857733	Mouse	PMID:20053883

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern