Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CNTN1
  • Mouse genes Cntn1
  • Rat genes Cntn1
  • Zfish genes cntn1a,cntn1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cntn1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0030246	carbohydrate binding	Cntn1	IDA		Mouse	PMID:19458237
Molecular Function	GO:0005515	protein binding	CNTN1	IPI	UniProtKB:P23471	Human	PMID:21969550
Molecular Function	GO:0005515	protein binding	CNTN1	IPI	UniProtKB:Q9UHC6	Human	PMID:26721881
Molecular Function	GO:0005515	protein binding	Cntn1	IPI	PR:B9EKR1	Mouse	PMID:12700241
Molecular Function	GO:0005515	protein binding	Cntn1	IPI	PR:P24807	Mouse	PMID:19458237
Molecular Function	GO:0005515	protein binding	Cntn1	IPI	UniProtKB:Q69ZR9	Mouse	PMID:31112734
Molecular Function	GO:0005515	protein binding	Cntn1	IPI	RGD:3455	Rat	PMID:11520897|RGD:9590114
Molecular Function	GO:0005515	protein binding	Cntn1	IPI	UniProtKB:P97846	Rat	PMID:12963709|RGD:8554274
Cellular Component	GO:0070062	extracellular exosome	CNTN1	HDA		Human	PMID:23533145
Cellular Component	GO:0045121	membrane raft	Cntn1	IDA		Rat	PMID:20844127|RGD:4889597
Cellular Component	GO:0043209	myelin sheath	Cntn1	HDA		Mouse	MGI:MGI:3834050|PMID:17634366
Cellular Component	GO:0045211	postsynaptic membrane	Cntn1	IDA		Mouse	PMID:1729438
Cellular Component	GO:0042734	presynaptic membrane	Cntn1	IDA		Mouse	PMID:1729438
Biological Process	GO:0032289	central nervous system myelin formation	Cntn1	IGI	MGI:MGI:96912	Mouse	PMID:31641127
Biological Process	GO:0021549	cerebellum development	Cntn1	IMP	MGI:MGI:3043422	Mouse	PMID:18354028
Biological Process	GO:0010467	gene expression	Cntn1	IMP	MGI:MGI:2384082	Mouse	PMID:16029194
Biological Process	GO:0007626	locomotory behavior	Cntn1	IMP	MGI:MGI:5050725	Mouse	PMID:31641127
Biological Process	GO:0042552	myelination	Cntn1	IMP	MGI:MGI:5050725	Mouse	PMID:31641127
Biological Process	GO:0042552	myelination	Cntn1	IGI	MGI:MGI:96912	Mouse	PMID:31641127
Biological Process	GO:0031175	neuron projection development	Cntn1	IGI	MGI:MGI:104518	Mouse	PMID:19458237
Biological Process	GO:0031175	neuron projection development	Cntn1	IGI	MGI:MGI:1858201	Mouse	PMID:19458237
Biological Process	GO:0031175	neuron projection development	Cntn1	IGI	MGI:MGI:88323	Mouse	PMID:19458237
Biological Process	GO:0010628	positive regulation of gene expression	Cntn1	IMP	MGI:MGI:2384082	Mouse	PMID:16029194
Biological Process	GO:0010976	positive regulation of neuron projection development	Cntn1	IGI	MGI:MGI:98247	Mouse	PMID:18354028
Biological Process	GO:0050731	positive regulation of peptidyl-tyrosine phosphorylation	Cntn1	IMP		Rat	PMID:20844127|RGD:4889597
Biological Process	GO:0010765	positive regulation of sodium ion transport	Cntn1	IMP	MGI:MGI:2384082	Mouse	PMID:16029194

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern