Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CKAP4
  • Mouse genes Ckap4
  • Rat genes Ckap4
  • Zfish genes ckap4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ckap4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CKAP4	IPI	UniProtKB:Q00765	Human	PMID:32075961
Molecular Function	GO:0005515	protein binding	Ckap4	IPI	UniProtKB:Q60870	Mouse	MGI:MGI:6401630|PMID:32075961
Molecular Function	GO:0003723	RNA binding	CKAP4	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	CKAP4	HDA		Human	PMID:22681889
Cellular Component	GO:0005783	endoplasmic reticulum	CKAP4	IDA		Human	PMID:19401338
Cellular Component	GO:0005783	endoplasmic reticulum	Ckap4	IDA		Mouse	PMID:14645249
Cellular Component	GO:0070062	extracellular exosome	CKAP4	HDA		Human	PMID:19056867
Cellular Component	GO:0005811	lipid droplet	CKAP4	IDA		Human	PMID:14741744
Cellular Component	GO:0005791	rough endoplasmic reticulum	CKAP4	IDA		Human	PMID:24454821

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern