Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CITED4
  • Mouse genes Cited4
  • Rat genes Cited4
  • Zfish genes cited4a,cited4b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cited4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003713	transcription coactivator activity	Cited4	IDA		Mouse	MGI:MGI:4412463|PMID:11581164
Molecular Function	GO:0003713	transcription coactivator activity	Cited4	IPI	PR:P45481	Mouse	PMID:12504852
Molecular Function	GO:0003713	transcription coactivator activity	Cited4	IDA		Mouse	PMID:12504852
Cellular Component	GO:0005737	cytoplasm	Cited4	IDA		Mouse	PMID:12504852
Cellular Component	GO:0005634	nucleus	Cited4	IDA		Mouse	PMID:12504852
Biological Process	GO:0006351	DNA-templated transcription	Cited4	IPI	PR:P45481	Mouse	MGI:MGI:2447223|PMID:12504852
Biological Process	GO:0042692	muscle cell differentiation	cited4b	IMP	ZFIN:ZDB-MRPHLNO-130918-4,ZFIN:ZDB-MRPHLNO-130918-5	Zfish	PMID:23789100
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Cited4	IPI	PR:P45481	Mouse	MGI:MGI:2447223|PMID:12504852
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Cited4	IDA		Mouse	PMID:12504852
Biological Process	GO:0043627	response to estrogen	Cited4	IDA		Mouse	MGI:MGI:4412463|PMID:11581164

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern