Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CHSY1
  • Mouse genes Chsy1
  • Rat genes Chsy1
  • Zfish genes chsy1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Chsy1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0047238	glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity	CHSY1	IDA		Human	PMID:11514575
Molecular Function	GO:0047238	glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity	Chsy1	IGI	MGI:MGI:106576	Mouse	PMID:22952769
Molecular Function	GO:0016757	glycosyltransferase activity	Chsy1	IMP		Mouse	PMID:22952769
Molecular Function	GO:0050510	N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity	CHSY1	IDA		Human	PMID:11514575
Molecular Function	GO:0050510	N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity	Chsy1	IGI	MGI:MGI:106576	Mouse	PMID:22952769
Cellular Component	GO:0005576	extracellular region	CHSY1	IDA		Human	PMID:21129727
Cellular Component	GO:0005794	Golgi apparatus	Chsy1	IDA		Mouse	PMID:6781479
Cellular Component	GO:0016020	membrane	CHSY1	HDA		Human	PMID:19946888
Biological Process	GO:0060349	bone morphogenesis	Chsy1	IMP	MGI:MGI:5007063	Mouse	PMID:22280990
Biological Process	GO:0051216	cartilage development	Chsy1	IMP	MGI:MGI:5007063	Mouse	PMID:22280990
Biological Process	GO:0060536	cartilage morphogenesis	chsy1	IMP	ZFIN:ZDB-MRPHLNO-110301-1	Zfish	PMID:21129728
Biological Process	GO:0060536	cartilage morphogenesis	chsy1	IMP	ZFIN:ZDB-MRPHLNO-050218-1,ZFIN:ZDB-MRPHLNO-110301-2	Zfish	PMID:21129727
Biological Process	GO:0060536	cartilage morphogenesis	chsy1	IMP	ZFIN:ZDB-MRPHLNO-050218-1	Zfish	PMID:21129728
Biological Process	GO:0002063	chondrocyte development	Chsy1	IMP	MGI:MGI:5007063	Mouse	PMID:22280990
Biological Process	GO:0030206	chondroitin sulfate biosynthetic process	CHSY1	IDA		Human	PMID:11514575
Biological Process	GO:0030206	chondroitin sulfate biosynthetic process	Chsy1	IGI	MGI:MGI:106576	Mouse	PMID:22952769
Biological Process	GO:0050650	chondroitin sulfate proteoglycan biosynthetic process	chsy1	IMP	ZFIN:ZDB-MRPHLNO-050218-1,ZFIN:ZDB-MRPHLNO-110301-2	Zfish	PMID:22869369
Biological Process	GO:0003007	heart morphogenesis	chsy1	IMP	ZFIN:ZDB-MRPHLNO-050218-1	Zfish	PMID:19890913
Biological Process	GO:0030279	negative regulation of ossification	CHSY1	IMP		Human	PMID:21129727
Biological Process	GO:0033339	pectoral fin development	chsy1	IMP	ZFIN:ZDB-MRPHLNO-050218-1,ZFIN:ZDB-MRPHLNO-110301-2	Zfish	PMID:21129727
Biological Process	GO:0045880	positive regulation of smoothened signaling pathway	Chsy1	IMP	MGI:MGI:5007063	Mouse	PMID:22280990
Biological Process	GO:0009954	proximal/distal pattern formation	Chsy1	IMP	MGI:MGI:5007063	Mouse	PMID:22280990
Biological Process	GO:0008593	regulation of Notch signaling pathway	chsy1	IMP	ZFIN:ZDB-MRPHLNO-050218-1,ZFIN:ZDB-MRPHLNO-110301-2	Zfish	PMID:21129727
Biological Process	GO:0031667	response to nutrient levels	Chsy1	IEP		Rat	PMID:14975935|RGD:2306428
Biological Process	GO:0060041	retina development in camera-type eye	chsy1	IMP	ZFIN:ZDB-MRPHLNO-050218-1,ZFIN:ZDB-MRPHLNO-110301-2	Zfish	PMID:21129727
Biological Process	GO:0060042	retina morphogenesis in camera-type eye	chsy1	IMP	ZFIN:ZDB-MRPHLNO-110301-1	Zfish	PMID:21129728
Biological Process	GO:0060042	retina morphogenesis in camera-type eye	chsy1	IMP	ZFIN:ZDB-MRPHLNO-050218-1	Zfish	PMID:21129728
Biological Process	GO:0060876	semicircular canal formation	chsy1	IMP	ZFIN:ZDB-MRPHLNO-110301-1	Zfish	PMID:21129728
Biological Process	GO:0060876	semicircular canal formation	chsy1	IMP	ZFIN:ZDB-MRPHLNO-050218-1	Zfish	PMID:21129728
Biological Process	GO:0051923	sulfation	Chsy1	IMP	MGI:MGI:5007063	Mouse	PMID:22280990

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern