Comparative GO Graph (mouse, human, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CHN1
  • Mouse genes Chn1
  • Rat genes Chn1
  • Zfish genes chn1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Chn1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0046875	ephrin receptor binding	Chn1	IPI	UniProtKB:Q03137|UniProtKB:Q8CBF3	Mouse	MGI:MGI:3767884|PMID:17785183
Molecular Function	GO:0046875	ephrin receptor binding	Chn1	IPI	UniProtKB:Q03137	Mouse	MGI:MGI:3759704|PMID:17719550
Molecular Function	GO:0005096	GTPase activator activity	chn1	IMP	ZFIN:ZDB-MRPHLNO-060501-2	Zfish	PMID:16569702
Molecular Function	GO:0005096	GTPase activator activity	chn1	IDA		Zfish	PMID:16569702
Molecular Function	GO:0005096	GTPase activator activity	chn1	IMP	ZFIN:ZDB-MRPHLNO-060501-1	Zfish	PMID:16569702
Molecular Function	GO:0001565	phorbol ester receptor activity	chn1	IDA		Zfish	PMID:16569702
Molecular Function	GO:0005515	protein binding	CHN1	IPI	UniProtKB:O43639	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	CHN1	IPI	UniProtKB:O43639	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CHN1	IPI	UniProtKB:Q9Y5R4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CHN1	IPI	UniProtKB:O43639	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	CHN1	IPI	UniProtKB:O43639	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	CHN1	IPI	UniProtKB:Q9Y5R4	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	CHN1	IPI	UniProtKB:O43639	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHN1	IPI	UniProtKB:P28482	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHN1	IPI	UniProtKB:Q8NFD2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHN1	IPI	UniProtKB:Q9Y5R4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Chn1	IPI	UniProtKB:Q03137	Mouse	MGI:MGI:3767884|PMID:17785183
Molecular Function	GO:0005515	protein binding	Chn1	IPI	UniProtKB:Q03137	Mouse	MGI:MGI:3759704|PMID:17719550
Biological Process	GO:0048013	ephrin receptor signaling pathway	Chn1	IMP		Mouse	MGI:MGI:3767884|PMID:17785183
Biological Process	GO:0008045	motor neuron axon guidance	Chn1	IMP		Mouse	MGI:MGI:3767884|PMID:17785183
Biological Process	GO:0021623	oculomotor nerve formation	chn1	IMP	ZFIN:ZDB-MRPHLNO-060501-1	Zfish	PMID:24133258
Biological Process	GO:0043547	positive regulation of GTPase activity	chn1	IDA		Zfish	PMID:16569702
Biological Process	GO:0050770	regulation of axonogenesis	Chn1	IMP		Mouse	MGI:MGI:3767884|PMID:17785183
Biological Process	GO:0050770	regulation of axonogenesis	Chn1	IDA		Mouse	MGI:MGI:3759704|PMID:17719550
Biological Process	GO:0043087	regulation of GTPase activity	Chn1	IDA		Mouse	MGI:MGI:3759704|PMID:17719550

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern