Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Cd9

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes CD9
- Mouse genes Cd9
- Rat genes Cd9
- Zfish genes cd9a,cd9b
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cd9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005178	integrin binding	CD9	IDA		Human	PMID:12796480
Molecular Function	GO:0005178	integrin binding	CD9	IDA		Human	PMID:27993971
Molecular Function	GO:0005178	integrin binding	Cd9	IPI	UniProtKB:P09055\|UniProtKB:Q61739	Mouse	MGI:MGI:1351541\|PMID:10634791
Molecular Function	GO:0005178	integrin binding	Cd9	IPI	RGD:628869	Rat	PMID:17684062\|RGD:2302243
Molecular Function	GO:0005178	integrin binding	Cd9	IPI	RGD:1593249	Rat	PMID:20124479\|RGD:9698434
Molecular Function	GO:0005515	protein binding	CD9	IPI	UniProtKB:Q9P2B2	Human	PMID:11278880
Molecular Function	GO:0005515	protein binding	CD9	IPI	UniProtKB:Q969P0	Human	PMID:11504738
Molecular Function	GO:0005515	protein binding	CD9	IPI	UniProtKB:P05556	Human	PMID:12796480
Molecular Function	GO:0005515	protein binding	CD9	IPI	UniProtKB:P60033	Human	PMID:12796480
Molecular Function	GO:0005515	protein binding	CD9	IPI	UniProtKB:Q9Y624	Human	PMID:15344881
Molecular Function	GO:0005515	protein binding	CD9	IPI	UniProtKB:Q86YL7	Human	PMID:18541721
Molecular Function	GO:0005515	protein binding	CD9	IPI	UniProtKB:O14672	Human	PMID:23091066
Molecular Function	GO:0005515	protein binding	CD9	IPI	UniProtKB:Q9P2B2	Human	PMID:23091066
Molecular Function	GO:0005515	protein binding	CD9	IPI	UniProtKB:O14672	Human	PMID:23289620
Molecular Function	GO:0005515	protein binding	CD9	IPI	UniProtKB:P08473	Human	PMID:23289620
Molecular Function	GO:0005515	protein binding	CD9	IPI	UniProtKB:Q9P2B2	Human	PMID:23289620
Molecular Function	GO:0005515	protein binding	CD9	IPI	UniProtKB:P60033	Human	PMID:23858057
Molecular Function	GO:0005515	protein binding	CD9	IPI	UniProtKB:O14672	Human	PMID:26686862
Molecular Function	GO:0005515	protein binding	CD9	IPI	UniProtKB:Q9P2B2	Human	PMID:26686862
Molecular Function	GO:0005515	protein binding	CD9	IPI	UniProtKB:Q9P2B2	Human	PMID:30833792
Molecular Function	GO:0005515	protein binding	CD9	IPI	UniProtKB:Q2M2E3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Cd9	IPI	UniProtKB:P09055,UniProtKB:P11835,UniProtKB:P20491,UniProtKB:Q08857	Mouse	MGI:MGI:5700288\|PMID:23395392
Molecular Function	GO:0005515	protein binding	Cd9	IPI	UniProtKB:P35762	Mouse	MGI:MGI:6282938\|PMID:23575678
Molecular Function	GO:0005515	protein binding	Cd9	IPI	PR:Q8R366	Mouse	PMID:11504738
Molecular Function	GO:0005515	protein binding	Cd9	IPI	MGI:MGI:1347250	Mouse	PMID:11805154
Molecular Function	GO:0005515	protein binding	Cd9	IPI	PR:Q8R366	Mouse	PMID:22687584
Molecular Function	GO:0005515	protein binding	Cd9	IPI	UniProtKB:Q62786	Rat	PMID:11278880\|RGD:8553711
Cellular Component	GO:0016324	apical plasma membrane	Cd9	IDA		Rat	PMID:17684062\|RGD:2302243
Cellular Component	GO:0009986	cell surface	Cd9	IDA		Mouse	PMID:28032533
Cellular Component	GO:0009986	cell surface	Cd9	IDA		Rat	PMID:7823164\|RGD:724648
Cellular Component	GO:0009897	external side of plasma membrane	Cd9	IDA		Mouse	PMID:15199151
Cellular Component	GO:0070062	extracellular exosome	CD9	IDA		Human	PMID:15326289
Cellular Component	GO:0070062	extracellular exosome	CD9	IDA		Human	PMID:15908444
Cellular Component	GO:0070062	extracellular exosome	CD9	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	CD9	HDA		Human	PMID:19199708
Cellular Component	GO:0070062	extracellular exosome	CD9	HDA		Human	PMID:23533145
Cellular Component	GO:0070062	extracellular exosome	Cd9	IDA		Mouse	PMID:24205035
Cellular Component	GO:0070062	extracellular exosome	Cd9	IDA		Rat	PMID:25590961\|RGD:11079186
Cellular Component	GO:0005615	extracellular space	CD9	HDA		Human	PMID:16502470
Cellular Component	GO:1903561	extracellular vesicle	CD9	HDA		Human	PMID:24769233
Cellular Component	GO:0005925	focal adhesion	CD9	HDA		Human	PMID:21423176
Cellular Component	GO:0016020	membrane	Cd9	IDA		Mouse	MGI:MGI:5700288\|PMID:23395392
Cellular Component	GO:0005886	plasma membrane	Cd9	IDA		Mouse	MGI:MGI:1351541\|PMID:10634791
Cellular Component	GO:0032991	protein-containing complex	CD9	IDA		Human	PMID:15344881
Biological Process	GO:0007420	brain development	Cd9	IEP		Rat	PMID:8984196\|RGD:2326235
Biological Process	GO:0007155	cell adhesion	CD9	IDA		Human	PMID:7511626
Biological Process	GO:0008283	cell population proliferation	Cd9	IDA		Mouse	PMID:7650394
Biological Process	GO:0071404	cellular response to low-density lipoprotein particle stimulus	Cd9	IDA		Mouse	MGI:MGI:5700288\|PMID:23395392
Biological Process	GO:0007342	fusion of sperm to egg plasma membrane involved in single fertilization	CD9	IDA		Human	PMID:14575715
Biological Process	GO:0007342	fusion of sperm to egg plasma membrane involved in single fertilization	Cd9	IDA		Mouse	MGI:MGI:1351540\|PMID:10634790
Biological Process	GO:0007342	fusion of sperm to egg plasma membrane involved in single fertilization	Cd9	IDA		Mouse	MGI:MGI:5056242\|PMID:21690351
Biological Process	GO:0007342	fusion of sperm to egg plasma membrane involved in single fertilization	Cd9	IDA		Mouse	MGI:MGI:1353864\|PMID:10700183
Biological Process	GO:0007342	fusion of sperm to egg plasma membrane involved in single fertilization	Cd9	IDA		Mouse	MGI:MGI:1351541\|PMID:10634791
Biological Process	GO:0008347	glial cell migration	CD9	IMP		Human	PMID:26224160
Biological Process	GO:0014905	myoblast fusion involved in skeletal muscle regeneration	Cd9	IMP		Mouse	MGI:MGI:6282938\|PMID:23575678
Biological Process	GO:0008285	negative regulation of cell population proliferation	Cd9	IDA		Mouse	PMID:7650394
Biological Process	GO:0090331	negative regulation of platelet aggregation	CD9	IDA		Human	PMID:18541721
Biological Process	GO:0014003	oligodendrocyte development	Cd9	IEP		Rat	PMID:12420314\|RGD:2326210
Biological Process	GO:0030913	paranodal junction assembly	Cd9	IDA		Mouse	MGI:MGI:3027661\|PMID:14715942
Biological Process	GO:0048916	posterior lateral line development	cd9b	IMP	ZFIN:ZDB-MRPHLNO-110121-2	Zfish	PMID:21144052
Biological Process	GO:0031623	receptor internalization	Cd9	IDA		Mouse	MGI:MGI:5700288\|PMID:23395392
Biological Process	GO:1905521	regulation of macrophage migration	Cd9	IDA		Mouse	MGI:MGI:3820146\|PMID:18662991
Biological Process	GO:0009414	response to water deprivation	Cd9	IEP		Rat	PMID:10898725\|RGD:2326211
Biological Process	GO:0007338	single fertilization	Cd9	IDA		Mouse	MGI:MGI:1351540\|PMID:10634790
Biological Process	GO:0007338	single fertilization	Cd9	IDA		Mouse	MGI:MGI:5056242\|PMID:21690351
Biological Process	GO:0007338	single fertilization	Cd9	IDA		Mouse	MGI:MGI:1351541\|PMID:10634791
Biological Process	GO:0035036	sperm-egg recognition	Cd9	IDA		Mouse	MGI:MGI:1351540\|PMID:10634790
Biological Process	GO:0035036	sperm-egg recognition	Cd9	IDA		Mouse	MGI:MGI:1351541\|PMID:10634791
Biological Process	GO:0035036	sperm-egg recognition	Cd9	IDA		Mouse	MGI:MGI:5056242\|PMID:21690351

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 05/07/2024 MGI 6.23

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.