Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CCN5
  • Mouse genes Ccn5
  • Rat genes Ccn5
  • Zfish genes ccn5
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ccn5

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005178	integrin binding	Ccn5	IDA		Rat	PMID:24488697|RGD:14390054
Molecular Function	GO:0005515	protein binding	CCN5	IPI	UniProtKB:P49639	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Ccn5	IPI	UniProtKB:Q8R2H2	Rat	PMID:24488697|RGD:14390054
Cellular Component	GO:0009986	cell surface	Ccn5	IDA		Rat	PMID:9742130|RGD:634515
Cellular Component	GO:0005737	cytoplasm	Ccn5	IDA		Rat	PMID:9742130|RGD:634515
Cellular Component	GO:0005615	extracellular space	CCN5	IDA		Human	PMID:10358067
Cellular Component	GO:0005615	extracellular space	CCN5	IDA		Human	PMID:23359679
Cellular Component	GO:0005615	extracellular space	Ccn5	IDA		Mouse	MGI:MGI:6282950|PMID:24451367
Cellular Component	GO:0005615	extracellular space	Ccn5	HDA		Mouse	MGI:MGI:5640941|PMID:24006456
Cellular Component	GO:0005615	extracellular space	Ccn5	IDA		Mouse	MGI:MGI:5473444|PMID:23359679
Cellular Component	GO:0005634	nucleus	CCN5	IDA		Human	PMID:20531984
Cellular Component	GO:0005634	nucleus	Ccn5	IDA		Mouse	MGI:MGI:6282983|PMID:20531984
Cellular Component	GO:0005634	nucleus	Ccn5	IDA		Rat	PMID:20531984|RGD:14390058
Cellular Component	GO:0005886	plasma membrane	Ccn5	IDA		Mouse	PMID:9742130
Cellular Component	GO:0002102	podosome	Ccn5	IDA		Rat	PMID:24488697|RGD:14390054
Biological Process	GO:0008285	negative regulation of cell population proliferation	Ccn5	IDA		Rat	PMID:9742130|RGD:634515
Biological Process	GO:0001558	regulation of cell growth	Ccn5	IDA		Mouse	PMID:9742130

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern