Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CCL28
  • Mouse genes Ccl28
  • Rat genes Ccl28
  • Zfish genes ccl27b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ccl28

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008009	chemokine activity	CCL28	IDA		Human	PMID:18308860
Molecular Function	GO:0008009	chemokine activity	Ccl28	IDA		Mouse	MGI:MGI:5897759|PMID:12538707
Molecular Function	GO:0005515	protein binding	CCL28	IPI	UniProtKB:Q8WTU0	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	CCL28	IPI	UniProtKB:P25788	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CCL28	IPI	UniProtKB:Q8WTU0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CCL28	IPI	UniProtKB:Q9UNE7	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CCL28	IPI	UniProtKB:O00585	Human	PMID:28381538
Molecular Function	GO:0005515	protein binding	CCL28	IPI	UniProtKB:P02776	Human	PMID:28381538
Molecular Function	GO:0005515	protein binding	CCL28	IPI	UniProtKB:P02778	Human	PMID:28381538
Molecular Function	GO:0005515	protein binding	CCL28	IPI	UniProtKB:P13501	Human	PMID:28381538
Molecular Function	GO:0005515	protein binding	CCL28	IPI	UniProtKB:P48061	Human	PMID:28381538
Molecular Function	GO:0005515	protein binding	CCL28	IPI	UniProtKB:P51671	Human	PMID:28381538
Molecular Function	GO:0005515	protein binding	CCL28	IPI	UniProtKB:Q92583	Human	PMID:28381538
Molecular Function	GO:0005515	protein binding	CCL28	IPI	UniProtKB:Q9Y258	Human	PMID:28381538
Molecular Function	GO:0005515	protein binding	CCL28	IPI	UniProtKB:Q8WTU0	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	CCL28	IPI	UniProtKB:P51808	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCL28	IPI	UniProtKB:Q86WV8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCL28	IPI	UniProtKB:Q8WTU0	Human	PMID:32296183
Cellular Component	GO:0070062	extracellular exosome	CCL28	HDA		Human	PMID:19199708
Biological Process	GO:0061844	antimicrobial humoral immune response mediated by antimicrobial peptide	Ccl28	IDA		Mouse	MGI:MGI:5897759|PMID:12538707
Biological Process	GO:0060326	cell chemotaxis	CCL28	IDA		Human	PMID:18308860
Biological Process	GO:0060326	cell chemotaxis	Ccl28	IDA		Mouse	MGI:MGI:5897759|PMID:12538707
Biological Process	GO:0031640	killing of cells of another organism	Ccl28	IDA		Mouse	MGI:MGI:5897759|PMID:12538707
Biological Process	GO:1903237	negative regulation of leukocyte tethering or rolling	CCL28	IDA		Human	PMID:18308860
Biological Process	GO:0001954	positive regulation of cell-matrix adhesion	CCL28	IDA		Human	PMID:18308860
Biological Process	GO:0007204	positive regulation of cytosolic calcium ion concentration	Ccl28	IDA		Mouse	PMID:10781587
Biological Process	GO:0007584	response to nutrient	Ccl28	IEP		Rat	PMID:19829664|RGD:4892132

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern