Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CAPN5
  • Mouse genes Capn5
  • Rat genes Capn5
  • Zfish genes capn5a,capn5b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Capn5

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0009986	cell surface	CAPN5	IDA		Human	PMID:23055945
Cellular Component	GO:0070062	extracellular exosome	CAPN5	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	CAPN5	HDA		Human	PMID:23533145
Cellular Component	GO:0005925	focal adhesion	CAPN5	HDA		Human	PMID:21423176
Cellular Component	GO:0045202	synapse	Capn5	IDA		Mouse	PMID:27152965
Biological Process	GO:0060014	granulosa cell differentiation	Capn5	IEP		Rat	PMID:19415717|RGD:2313170
Biological Process	GO:0001553	luteinization	Capn5	IEP		Rat	PMID:19415717|RGD:2313170
Biological Process	GO:0001541	ovarian follicle development	Capn5	IEP		Rat	PMID:19415717|RGD:2313170

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern