Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes BRDT
  • Mouse genes Brdt
  • Rat genes Brdt
  • Zfish genes brdt
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Brdt

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042393	histone binding	BRDT	IDA		Human	PMID:22464331
Molecular Function	GO:0042393	histone binding	Brdt	IDA		Mouse	MGI:MGI:5430881|PMID:19794495
Molecular Function	GO:0042393	histone binding	Brdt	IDA		Mouse	PMID:12861021
Molecular Function	GO:0140566	histone reader activity	Brdt	IMP		Mouse	MGI:MGI:5447877|PMID:22922464
Molecular Function	GO:0070577	lysine-acetylated histone binding	Brdt	IMP		Mouse	MGI:MGI:5447877|PMID:22922464
Molecular Function	GO:0005515	protein binding	Brdt	IPI	UniProtKB:Q99J95|UniProtKB:Q9QWV9	Mouse	MGI:MGI:5447877|PMID:22922464
Molecular Function	GO:0005515	protein binding	Brdt	IPI	UniProtKB:P61979|UniProtKB:Q61656|UniProtKB:Q62093|UniProtKB:Q921F2	Mouse	MGI:MGI:5448498|PMID:22570411
Molecular Function	GO:0005515	protein binding	Brdt	IPI	UniProtKB:Q99J95	Mouse	MGI:MGI:5514133|PMID:20593818
Molecular Function	GO:0005515	protein binding	Brdt	IPI	RGD:1304726	Rat	PMID:22215678|RGD:9586361
Cellular Component	GO:0005634	nucleus	BRDT	IDA		Human	PMID:25593309
Cellular Component	GO:0005634	nucleus	Brdt	IDA		Mouse	MGI:MGI:3765355|PMID:17728347
Cellular Component	GO:0005634	nucleus	Brdt	IDA		Mouse	MGI:MGI:5430881|PMID:19794495
Cellular Component	GO:0005634	nucleus	Brdt	IDA		Mouse	PMID:12861021
Cellular Component	GO:0005634	nucleus	Brdt	IDA		Rat	PMID:22215678|RGD:9586361
Biological Process	GO:0006338	chromatin remodeling	Brdt	IDA		Mouse	MGI:MGI:5430881|PMID:19794495
Biological Process	GO:0006338	chromatin remodeling	Brdt	IDA		Mouse	PMID:12861021
Biological Process	GO:0006338	chromatin remodeling	Brdt	IDA		Rat	PMID:22215678|RGD:9586361
Biological Process	GO:0007141	male meiosis I	Brdt	IMP		Mouse	MGI:MGI:5447877|PMID:22922464
Biological Process	GO:0007140	male meiotic nuclear division	Brdt	IMP		Mouse	MGI:MGI:5447877|PMID:22922464
Biological Process	GO:0051039	positive regulation of transcription involved in meiotic cell cycle	Brdt	IMP		Mouse	MGI:MGI:5447877|PMID:22922464
Biological Process	GO:0006355	regulation of DNA-templated transcription	BRDT	IMP		Human	PMID:28199965
Biological Process	GO:0043484	regulation of RNA splicing	Brdt	IMP		Mouse	MGI:MGI:5448498|PMID:22570411
Biological Process	GO:0035092	sperm DNA condensation	Brdt	IMP		Mouse	MGI:MGI:5447877|PMID:22922464
Biological Process	GO:0007283	spermatogenesis	Brdt	IMP		Mouse	MGI:MGI:3765355|PMID:17728347
Biological Process	GO:0007283	spermatogenesis	Brdt	IEP		Rat	PMID:22215678|RGD:9586361

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern