Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes BRAT1
  • Mouse genes Brat1
  • Rat genes Brat1
  • Zfish genes brat1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Brat1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	BRAT1	IPI	UniProtKB:P38398	Human	PMID:16452482
Molecular Function	GO:0005515	protein binding	BRAT1	IPI	UniProtKB:Q13315	Human	PMID:16452482
Molecular Function	GO:0005515	protein binding	BRAT1	IPI	UniProtKB:P78527	Human	PMID:22977523
Molecular Function	GO:0005515	protein binding	BRAT1	IPI	UniProtKB:Q13315	Human	PMID:22977523
Molecular Function	GO:0005515	protein binding	BRAT1	IPI	UniProtKB:Q14683	Human	PMID:22977523
Molecular Function	GO:0005515	protein binding	BRAT1	IPI	UniProtKB:Q9BT67	Human	PMID:25631046
Molecular Function	GO:0005515	protein binding	BRAT1	IPI	UniProtKB:P42345	Human	PMID:25657994
Molecular Function	GO:0005515	protein binding	BRAT1	IPI	UniProtKB:Q8N122	Human	PMID:25657994
Molecular Function	GO:0005515	protein binding	BRAT1	IPI	UniProtKB:A6NI15	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BRAT1	IPI	UniProtKB:Q13287	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BRAT1	IPI	UniProtKB:Q8N6Y0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BRAT1	IPI	UniProtKB:Q9H0I2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BRAT1	IPI	UniProtKB:O14901	Human	PMID:32814053
Cellular Component	GO:0005737	cytoplasm	BRAT1	IDA		Human	PMID:25631046
Cellular Component	GO:0005737	cytoplasm	Brat1	IDA		Mouse	MGI:MGI:5645176|PMID:25631046
Cellular Component	GO:0016020	membrane	BRAT1	HDA		Human	PMID:19946888
Cellular Component	GO:0005654	nucleoplasm	BRAT1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	BRAT1	IDA		Human	PMID:16452482
Cellular Component	GO:0005634	nucleus	BRAT1	IDA		Human	PMID:25631046
Cellular Component	GO:0005634	nucleus	Brat1	IDA		Mouse	MGI:MGI:5645176|PMID:25631046
Biological Process	GO:0006915	apoptotic process	BRAT1	IMP		Human	PMID:25070371
Biological Process	GO:0016477	cell migration	BRAT1	IMP		Human	PMID:25070371
Biological Process	GO:0008283	cell population proliferation	BRAT1	IMP		Human	PMID:25070371
Biological Process	GO:0006974	DNA damage response	BRAT1	IMP		Human	PMID:25631046
Biological Process	GO:0006006	glucose metabolic process	BRAT1	IMP		Human	PMID:25070371
Biological Process	GO:0051646	mitochondrion localization	BRAT1	IMP		Human	PMID:25070371
Biological Process	GO:0030307	positive regulation of cell growth	BRAT1	IMP		Human	PMID:25070371
Biological Process	GO:0001934	positive regulation of protein phosphorylation	BRAT1	IMP		Human	PMID:22977523
Biological Process	GO:0010212	response to ionizing radiation	BRAT1	IMP		Human	PMID:16452482

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern