About   Help   FAQ
Brat1
Gene Detail
 Symbol
Name
ID
Brat1
BRCA1-associated ATM activator 1
MGI:1891679
Synonyms Baat1
Feature Type protein coding gene
Genetic Map
Chromosome 5
79.25 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr5:140705011-140719379 bp, + strand
From VEGA annotation of GRCm38

  14369 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:16776  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Brat1

Human
homologs
Human Homolog BRAT1, BRCA1-associated ATM activator 1
NCBI Gene ID 221927
neXtProt AC  NX_Q6PJG6
Human Synonyms  BAAT1, C7orf27, RMFSL
Human Chr (Location)  7p22.3; chr7:2537810-2555758 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human BRAT1
Alleles
and
phenotypes
All alleles(10) : Targeted(2) Gene trapped(8)
Gene Ontology
(GO)
classifications
All GO classifications: (2 annotations)
Process response to ionizing radiation
Component nucleus
External Resources: FuncBase
Expression
cDNA source data(34)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(34) cDNA(34)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000024801 (Evidence)
Ensembl Gene ModelENSMUSG00000000148 (Evidence)
Entrez Gene231841 (Evidence)
UniGene271932
DFCITC1577934, TC1588725, TC1594984, TC1664369, TC1692529
DoTSDT.101331012, DT.101367365, DT.40164692, DT.55229403, DT.87047569, DT.94138096, DT.97367313
NIA Mouse Gene IndexU006378
Consensus CDS ProjectCCDS19823.1, CCDS39359.1
International Mouse Knockout Project StatusBrat1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024801 VEGA Gene Model | MGI Sequence Detail 14369 C57BL/6J ±  kb
transcript OTTMUST00000061083 VEGA | MGI Sequence Detail 3431 Not Applicable 
polypeptide OTTMUSP00000029892 VEGA | MGI Sequence Detail 867 Not Applicable 

For the selected sequences
All sequences(75) RefSeq(14) UniProt(5)
Polymorphisms SNPs within 2kb(59 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR011989 Armadillo-like helical
InterPro IPR016024 Armadillo-type fold
InterPro IPR000357 HEAT
Protein Ontology PR:000032173 BRCA1-associated ATM activator 1
References (Earliest) J:60593 Millonig JH, et al., The mouse Dreher gene Lmx1a controls formation of the roof plate in the vertebrate CNS [see comments]. Nature. 2000 Feb 17;403(6771):764-9
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(29)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
04/15/2014
MGI 5.17
The Jackson Laboratory