Brat1
Gene Detail

Symbol Name ID

Brat1 BRCA1-associated ATM activator 1 MGI:1891679

Synonyms

Baat1

Feature Type

protein coding gene

Genetic Map

Chromosome 5

79.25 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr5:140705011-140719379 bp, + strand From VEGA annotation of GRCm38   14369 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:16776  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Brat1

Human homologs

Human Homolog		BRAT1, BRCA1-associated ATM activator 1
NCBI Gene ID		221927
neXtProt AC		NX_Q6PJG6
Human Synonyms		BAAT1, C7orf27, RMFSL
Human Chr (Location)		7p22.3; chr7:2577444-2595392 (-)  GRCh37.p10
Disease Associations		(1) Diseases Associated with Human BRAT1

Alleles and phenotypes

All alleles(10) : Targeted(2) Gene trapped(8)

Gene Ontology (GO) classifications

All GO classifications: (2 annotations)

Process	response to ionizing radiation
Component	nucleus

External Resources: FuncBase

Expression

cDNA source data(34)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(34) cDNA(34)
Microarray probesets(6)

Other database links

VEGA Gene Model	OTTMUSG00000024801 (Evidence)
Ensembl Gene Model	ENSMUSG00000000148 (Evidence)
Entrez Gene	231841 (Evidence)
UniGene	271932
DFCI	TC1577934, TC1588725, TC1594984, TC1664369, TC1692529
DoTS	DT.101331012, DT.101367365, DT.40164692, DT.55229403, DT.87047569, DT.94138096, DT.97367313
NIA Mouse Gene Index	U006378
Consensus CDS Project	CCDS19823.1, CCDS39359.1
International Mouse Knockout Project Status	Brat1

Sequences

Length	Strain/Species
genomic	OTTMUSG00000024801	VEGA Gene Model | MGI Sequence Detail	14369	C57BL/6J
transcript	OTTMUST00000061083	VEGA | MGI Sequence Detail	3431	Not Applicable
polypeptide	OTTMUSP00000029892	VEGA | MGI Sequence Detail	867	Not Applicable

All sequences(68) RefSeq(7) UniProt(5)

Polymorphisms

SNPs(55 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR011989	Armadillo-like helical
InterPro	IPR016024	Armadillo-type fold
InterPro	IPR000357	HEAT
Protein Ontology	PR:000032173	BRCA1-associated ATM activator 1

References

(Earliest) J:60593 Millonig JH, et al., The mouse Dreher gene Lmx1a controls formation of the roof plate in the vertebrate CNS [see comments]. Nature. 2000 Feb 17;403(6771):764-9
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(29)