Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes BMPER
  • Mouse genes Bmper
  • Rat genes Bmper
  • Zfish genes bmper
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Bmper

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0050840	extracellular matrix binding	bmper	IDA		Zfish	PMID:16439480
Molecular Function	GO:0005515	protein binding	Bmper	IPI	PR:P21275	Mouse	PMID:12897139
Molecular Function	GO:0005515	protein binding	Bmper	IPI	PR:P20722	Mouse	PMID:12897139
Molecular Function	GO:0005515	protein binding	Bmper	IPI	PR:P21274	Mouse	PMID:12897139
Molecular Function	GO:0005515	protein binding	bmper	IPI	UniProtKB:P18075	Zfish	PMID:16439480
Molecular Function	GO:0005515	protein binding	bmper	IPI	UniProtKB:P12643	Zfish	PMID:16439480
Molecular Function	GO:0005515	protein binding	bmper	IPI	ZFIN:ZDB-GENE-990415-33	Zfish	PMID:20886103
Molecular Function	GO:0005515	protein binding	bmper	IPI	UniProtKB:P43026	Zfish	PMID:16439480
Molecular Function	GO:0005515	protein binding	bmper	IPI	UniProtKB:P12644	Zfish	PMID:16439480
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Bmper	HDA		Mouse	MGI:MGI:6201834|PMID:22159717
Cellular Component	GO:0031012	extracellular matrix	bmper	IDA		Zfish	PMID:16439480
Cellular Component	GO:0005576	extracellular region	Bmper	IDA		Mouse	PMID:12897139
Cellular Component	GO:0005615	extracellular space	BMPER	IDA		Human	PMID:18787191
Cellular Component	GO:0005615	extracellular space	Bmper	HDA		Mouse	MGI:MGI:5640941|PMID:24006456
Cellular Component	GO:0005615	extracellular space	bmper	IDA		Zfish	PMID:16439480
Biological Process	GO:0001568	blood vessel development	bmper	IMP	ZFIN:ZDB-MRPHLNO-071005-2	Zfish	PMID:17618647
Biological Process	GO:0001568	blood vessel development	bmper	IMP	ZFIN:ZDB-MRPHLNO-071005-1	Zfish	PMID:29473997
Biological Process	GO:0001568	blood vessel development	bmper	IMP	ZFIN:ZDB-MRPHLNO-071005-1	Zfish	PMID:17618647
Biological Process	GO:0002043	blood vessel endothelial cell proliferation involved in sprouting angiogenesis	BMPER	IDA		Human	PMID:18787191
Biological Process	GO:0030509	BMP signaling pathway	Bmper	IMP	MGI:MGI:3711028	Mouse	PMID:20807528
Biological Process	GO:0007182	common-partner SMAD protein phosphorylation	Bmper	IMP	MGI:MGI:3711028	Mouse	PMID:20807528
Biological Process	GO:0009953	dorsal/ventral pattern formation	bmper	IMP	ZFIN:ZDB-MRPHLNO-071005-1	Zfish	PMID:20886103
Biological Process	GO:0009953	dorsal/ventral pattern formation	bmper	IGI	ZFIN:ZDB-MRPHLNO-050221-6,ZFIN:ZDB-MRPHLNO-071005-1	Zfish	PMID:20886103
Biological Process	GO:0042118	endothelial cell activation	BMPER	IDA		Human	PMID:18787191
Biological Process	GO:0030097	hemopoiesis	bmper	IMP	ZFIN:ZDB-MRPHLNO-071005-1	Zfish	PMID:17618647
Biological Process	GO:0030097	hemopoiesis	bmper	IMP	ZFIN:ZDB-MRPHLNO-071005-2	Zfish	PMID:17618647
Biological Process	GO:0048839	inner ear development	Bmper	IDA		Mouse	PMID:21795542
Biological Process	GO:0030514	negative regulation of BMP signaling pathway	Bmper	IDA		Mouse	PMID:12897139
Biological Process	GO:0014029	neural crest formation	bmper	IMP	ZFIN:ZDB-MRPHLNO-060320-3	Zfish	PMID:24089471
Biological Process	GO:0043049	otic placode formation	bmper	IGI	ZFIN:ZDB-MRPHLNO-050221-6,ZFIN:ZDB-MRPHLNO-060320-5,ZFIN:ZDB-MRPHLNO-101102-5	Zfish	PMID:19418450
Biological Process	GO:0070374	positive regulation of ERK1 and ERK2 cascade	BMPER	IDA		Human	PMID:18787191
Biological Process	GO:1903672	positive regulation of sprouting angiogenesis	BMPER	IGI	RNAcentral:URS0000535FDD_9606	Human	PMID:28124060
Biological Process	GO:0045765	regulation of angiogenesis	bmper	IMP	ZFIN:ZDB-MRPHLNO-071005-1	Zfish	PMID:23641068
Biological Process	GO:0045765	regulation of angiogenesis	bmper	IGI	ZFIN:ZDB-MRPHLNO-050119-5,ZFIN:ZDB-MRPHLNO-071005-1	Zfish	PMID:23641068
Biological Process	GO:0030510	regulation of BMP signaling pathway	bmper	IGI	ZFIN:ZDB-GENE-990415-33	Zfish	PMID:16439480
Biological Process	GO:0030510	regulation of BMP signaling pathway	bmper	IMP	ZFIN:ZDB-MRPHLNO-060320-3	Zfish	PMID:24089471
Biological Process	GO:0010594	regulation of endothelial cell migration	BMPER	IDA		Human	PMID:18787191
Biological Process	GO:0060393	regulation of pathway-restricted SMAD protein phosphorylation	BMPER	IDA		Human	PMID:18787191
Biological Process	GO:0032880	regulation of protein localization	Bmper	IMP	MGI:MGI:3711028	Mouse	PMID:20807528
Biological Process	GO:0001657	ureteric bud development	Bmper	IEP		Mouse	MGI:MGI:3655805|PMID:16545622

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern