Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes AUP1
  • Mouse genes Aup1
  • Rat genes Aup1
  • Zfish genes aup1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Aup1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	AUP1	IPI	UniProtKB:P60604	Human	PMID:22119785
Molecular Function	GO:0005515	protein binding	AUP1	IPI	UniProtKB:P35372	Human	PMID:23840749
Molecular Function	GO:0005515	protein binding	AUP1	IPI	UniProtKB:P29991:PRO_0000037944	Human	PMID:29902443
Molecular Function	GO:0005515	protein binding	AUP1	IPI	UniProtKB:P60604	Human	PMID:32296183
Molecular Function	GO:0031624	ubiquitin conjugating enzyme binding	AUP1	IPI	UniProtKB:P60604	Human	PMID:21127063
Molecular Function	GO:0031624	ubiquitin conjugating enzyme binding	AUP1	IPI	UniProtKB:P60604	Human	PMID:21857022
Molecular Function	GO:0031624	ubiquitin conjugating enzyme binding	AUP1	IPI	UniProtKB:P60604	Human	PMID:23223569
Molecular Function	GO:0031625	ubiquitin protein ligase binding	AUP1	IPI	UniProtKB:Q8WU17	Human	PMID:23223569
Molecular Function	GO:0031625	ubiquitin protein ligase binding	AUP1	IPI	UniProtKB:Q9UKV5	Human	PMID:23223569
Cellular Component	GO:0005776	autophagosome	AUP1	IDA		Human	PMID:29902443
Cellular Component	GO:0005783	endoplasmic reticulum	AUP1	IDA		Human	PMID:21857022
Cellular Component	GO:0005789	endoplasmic reticulum membrane	AUP1	IDA		Human	PMID:21127063
Cellular Component	GO:0005789	endoplasmic reticulum membrane	AUP1	IDA		Human	PMID:23197321
Cellular Component	GO:0005789	endoplasmic reticulum membrane	AUP1	IDA		Human	PMID:23223569
Cellular Component	GO:0070062	extracellular exosome	AUP1	HDA		Human	PMID:18570454
Cellular Component	GO:0005811	lipid droplet	AUP1	IDA		Human	PMID:21127063
Cellular Component	GO:0005811	lipid droplet	AUP1	IDA		Human	PMID:21857022
Cellular Component	GO:0005811	lipid droplet	AUP1	IDA		Human	PMID:23197321
Cellular Component	GO:0005811	lipid droplet	AUP1	IDA		Human	PMID:23223569
Cellular Component	GO:0005811	lipid droplet	AUP1	IDA		Human	PMID:29902443
Cellular Component	GO:0016020	membrane	AUP1	HDA		Human	PMID:19946888
Biological Process	GO:0071712	ER-associated misfolded protein catabolic process	AUP1	IMP		Human	PMID:21857022
Biological Process	GO:0140042	lipid droplet formation	AUP1	IMP		Human	PMID:21857022
Biological Process	GO:0034389	lipid droplet organization	AUP1	IDA		Human	PMID:24039768
Biological Process	GO:0061724	lipophagy	AUP1	IMP		Human	PMID:29902443
Biological Process	GO:1990044	protein localization to lipid droplet	AUP1	IDA		Human	PMID:21127063
Biological Process	GO:1990044	protein localization to lipid droplet	AUP1	IMP		Human	PMID:23223569
Biological Process	GO:0009615	response to virus	AUP1	IMP		Human	PMID:29902443
Biological Process	GO:0030970	retrograde protein transport, ER to cytosol	AUP1	IMP		Human	PMID:25660456
Biological Process	GO:0030433	ubiquitin-dependent ERAD pathway	AUP1	IMP		Human	PMID:23223569

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern