Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ATP2C1
  • Mouse genes Atp2c1
  • Rat genes Atp2c1
  • Zfish genes atp2c1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Atp2c1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005388	P-type calcium transporter activity	ATP2C1	IMP		Human	PMID:10615129
Molecular Function	GO:0005388	P-type calcium transporter activity	ATP2C1	IDA		Human	PMID:12810057
Molecular Function	GO:0005388	P-type calcium transporter activity	Atp2c1	IDA		Rat	PMID:15328051|RGD:1581800
Molecular Function	GO:0005388	P-type calcium transporter activity	Atp2c1	IDA		Rat	PMID:19527224|RGD:7241224
Molecular Function	GO:0140613	P-type manganese transporter activity	ATP2C1	IDA		Human	PMID:21187401
Cellular Component	GO:0033106	cis-Golgi network membrane	Atp2c1	IDA		Mouse	MGI:MGI:4361790|PMID:19793975
Cellular Component	GO:0005794	Golgi apparatus	ATP2C1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005794	Golgi apparatus	ATP2C1	IDA		Human	PMID:11741891
Cellular Component	GO:0005794	Golgi apparatus	Atp2c1	IDA		Mouse	PMID:23840669
Cellular Component	GO:0005794	Golgi apparatus	Atp2c1	IDA		Rat	PMID:12967911|RGD:1581806
Cellular Component	GO:0005794	Golgi apparatus	Atp2c1	IDA		Rat	PMID:19527224|RGD:7241224
Cellular Component	GO:0032580	Golgi cisterna membrane	Atp2c1	IDA		Mouse	MGI:MGI:4361790|PMID:19793975
Cellular Component	GO:0000139	Golgi membrane	ATP2C1	IDA		Human	PMID:12804581
Cellular Component	GO:0000139	Golgi membrane	ATP2C1	IDA		Human	PMID:21187401
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	Atp2c1	IDA		Rat	PMID:14747290|RGD:1581798
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	Atp2c1	IDA		Rat	PMID:19527224|RGD:7241224
Cellular Component	GO:0016020	membrane	ATP2C1	HDA		Human	PMID:19946888
Cellular Component	GO:0005886	plasma membrane	Atp2c1	IDA		Rat	PMID:14747290|RGD:1581798
Cellular Component	GO:0030141	secretory granule	Atp2c1	IDA		Rat	PMID:14747290|RGD:1581798
Cellular Component	GO:0005802	trans-Golgi network	ATP2C1	IDA		Human	PMID:14632183
Cellular Component	GO:0030133	transport vesicle	Atp2c1	IDA		Rat	PMID:14747290|RGD:1581798
Biological Process	GO:0031532	actin cytoskeleton reorganization	ATP2C1	IMP		Human	PMID:14632182
Biological Process	GO:0006816	calcium ion transport	ATP2C1	IMP		Human	PMID:10615129
Biological Process	GO:0006816	calcium ion transport	ATP2C1	IDA		Human	PMID:12810057
Biological Process	GO:0006816	calcium ion transport	Atp2c1	IMP		Rat	PMID:12967911|RGD:1581806
Biological Process	GO:0006816	calcium ion transport	Atp2c1	IDA		Rat	PMID:15328051|RGD:1581800
Biological Process	GO:0006816	calcium ion transport	Atp2c1	IDA		Rat	PMID:19527224|RGD:7241224
Biological Process	GO:0016339	calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules	ATP2C1	IMP		Human	PMID:14632182
Biological Process	GO:0008544	epidermis development	ATP2C1	IMP		Human	PMID:10615129
Biological Process	GO:0032468	Golgi calcium ion homeostasis	ATP2C1	IMP		Human	PMID:14632183
Biological Process	GO:0032468	Golgi calcium ion homeostasis	ATP2C1	IMP		Human	PMID:20439740
Biological Process	GO:0032468	Golgi calcium ion homeostasis	Atp2c1	IMP		Mouse	MGI:MGI:4361790|PMID:19793975
Biological Process	GO:0032472	Golgi calcium ion transport	ATP2C1	IMP		Human	PMID:14632183
Biological Process	GO:0006874	intracellular calcium ion homeostasis	ATP2C1	IMP		Human	PMID:10615129
Biological Process	GO:0006874	intracellular calcium ion homeostasis	ATP2C1	IDA		Human	PMID:12810057
Biological Process	GO:0006874	intracellular calcium ion homeostasis	Atp2c1	IMP		Rat	PMID:14747290|RGD:1581798
Biological Process	GO:0055071	manganese ion homeostasis	atp2c1	IMP	ZFIN:ZDB-MRPHLNO-170926-1	Zfish	PMID:28692648
Biological Process	GO:0006828	manganese ion transport	atp2c1	IMP	ZFIN:ZDB-MRPHLNO-170926-1	Zfish	PMID:28692648
Biological Process	GO:0042998	positive regulation of Golgi to plasma membrane protein transport	ATP2C1	IMP		Human	PMID:20439740
Biological Process	GO:0042998	positive regulation of Golgi to plasma membrane protein transport	Atp2c1	IMP		Mouse	MGI:MGI:4361790|PMID:19793975
Biological Process	GO:0043123	positive regulation of I-kappaB kinase/NF-kappaB signaling	ATP2C1	HMP		Human	PMID:12761501
Biological Process	GO:0098629	trans-Golgi network membrane organization	ATP2C1	IMP		Human	PMID:20439740

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern