Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ATN1
  • Mouse genes Atn1
  • Rat genes Atn1
  • Zfish genes atn1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Atn1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008432	JUN kinase binding	Atn1	IMP		Rat	PMID:12812981|RGD:1304391
Molecular Function	GO:0005515	protein binding	ATN1	IPI	UniProtKB:Q06455	Human	PMID:10973986
Molecular Function	GO:0005515	protein binding	ATN1	IPI	UniProtKB:O95967	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	ATN1	IPI	UniProtKB:P61289	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	ATN1	IPI	UniProtKB:P61964	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	ATN1	IPI	UniProtKB:Q12805	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	ATN1	IPI	UniProtKB:Q15654	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	ATN1	IPI	UniProtKB:Q9HAU0	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	ATN1	IPI	UniProtKB:Q9NWB1	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	ATN1	IPI	UniProtKB:Q9P2R6	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	ATN1	IPI	UniProtKB:Q9BQA5	Human	PMID:17577209
Molecular Function	GO:0005515	protein binding	ATN1	IPI	UniProtKB:Q14517	Human	PMID:19131340
Molecular Function	GO:0005515	protein binding	ATN1	IPI	UniProtKB:Q6Y7W6	Human	PMID:20696395
Molecular Function	GO:0005515	protein binding	ATN1	IPI	UniProtKB:P61964	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	ATN1	IPI	UniProtKB:P61964	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	ATN1	IPI	UniProtKB:P61964	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	ATN1	IPI	UniProtKB:P46934	Human	PMID:35044719
Molecular Function	GO:0005515	protein binding	ATN1	IPI	UniProtKB:P46937	Human	PMID:35044719
Molecular Function	GO:0005515	protein binding	ATN1	IPI	UniProtKB:O00308	Human	PMID:9647693
Molecular Function	GO:0005515	protein binding	ATN1	IPI	UniProtKB:Q86UL8	Human	PMID:9647693
Molecular Function	GO:0005515	protein binding	ATN1	IPI	UniProtKB:Q96J02	Human	PMID:9647693
Molecular Function	GO:0005515	protein binding	ATN1	IPI	UniProtKB:Q96QZ7	Human	PMID:9647693
Molecular Function	GO:0005515	protein binding	ATN1	IPI	UniProtKB:Q9H0M0	Human	PMID:9647693
Molecular Function	GO:0005515	protein binding	Atn1	IPI	PR:Q64104	Mouse	PMID:16702404
Molecular Function	GO:0005515	protein binding	Atn1	IPI	RGD:619814	Rat	PMID:10332026|RGD:9684992
Molecular Function	GO:0005515	protein binding	Atn1	IPI	UniProtKB:Q9WU10	Rat	PMID:19131340|RGD:8553319
Molecular Function	GO:0019904	protein domain specific binding	ATN1	IPI	UniProtKB:Q99698	Human	PMID:11984006
Molecular Function	GO:0003713	transcription coactivator activity	Atn1	IDA		Mouse	PMID:17150957
Molecular Function	GO:0003714	transcription corepressor activity	ATN1	IDA		Human	PMID:10973986
Molecular Function	GO:0003714	transcription corepressor activity	Atn1	IGI	MGI:MGI:1100526	Mouse	PMID:16702404
Cellular Component	GO:0031252	cell leading edge	Atn1	IDA		Rat	PMID:19131340|RGD:8553319
Cellular Component	GO:0005737	cytoplasm	Atn1	IDA		Mouse	PMID:19681162
Cellular Component	GO:0005737	cytoplasm	Atn1	IDA		Mouse	PMID:12464607
Cellular Component	GO:0016363	nuclear matrix	ATN1	IDA		Human	PMID:10973986
Cellular Component	GO:0005654	nucleoplasm	ATN1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	ATN1	IDA		Human	PMID:10085113
Cellular Component	GO:0005634	nucleus	Atn1	IDA		Mouse	PMID:19681162
Cellular Component	GO:0005634	nucleus	Atn1	IDA		Mouse	PMID:12464607
Cellular Component	GO:0005634	nucleus	Atn1	IDA		Rat	PMID:19131340|RGD:8553319
Cellular Component	GO:0048471	perinuclear region of cytoplasm	Atn1	IDA		Rat	PMID:19131340|RGD:8553319
Biological Process	GO:0001906	cell killing	Atn1	IDA		Mouse	PMID:12464607
Biological Process	GO:0016477	cell migration	Atn1	IDA		Mouse	MGI:MGI:3844415|PMID:19131340
Biological Process	GO:0008340	determination of adult lifespan	Atn1	IMP	MGI:MGI:4360645	Mouse	PMID:19681162
Biological Process	GO:0006351	DNA-templated transcription	Atn1	IGI	MGI:MGI:1100526	Mouse	MGI:MGI:3624573|PMID:16702404
Biological Process	GO:0030011	maintenance of cell polarity	Atn1	IDA		Mouse	MGI:MGI:3844415|PMID:19131340
Biological Process	GO:0008584	male gonad development	Atn1	IMP	MGI:MGI:4360645	Mouse	PMID:19681162
Biological Process	GO:0035264	multicellular organism growth	Atn1	IMP	MGI:MGI:4360645	Mouse	PMID:19681162
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	Atn1	IGI	MGI:MGI:1100526	Mouse	MGI:MGI:3624573|PMID:16702404
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	ATN1	IDA		Human	PMID:10973986
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Atn1	IDA		Mouse	PMID:16702404
Biological Process	GO:0051402	neuron apoptotic process	ATN1	IDA		Human	PMID:10085113
Biological Process	GO:0009791	post-embryonic development	Atn1	IMP	MGI:MGI:4360645	Mouse	PMID:19681162
Biological Process	GO:0045664	regulation of neuron differentiation	Atn1	IMP		Rat	PMID:12812981|RGD:1304391
Biological Process	GO:0032094	response to food	Atn1	IMP	MGI:MGI:4360645	Mouse	PMID:19681162
Biological Process	GO:0007283	spermatogenesis	Atn1	IMP	MGI:MGI:4360645	Mouse	PMID:19681162

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern