Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ATCAY
  • Mouse genes Atcay
  • Rat genes Atcay
  • Zfish genes atcaya,atcayb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Atcay

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0019894	kinesin binding	ATCAY	IPI	UniProtKB:Q07866	Human	PMID:19861499
Molecular Function	GO:0005515	protein binding	ATCAY	IPI	UniProtKB:Q9UNE7	Human	PMID:16275660
Molecular Function	GO:0005515	protein binding	ATCAY	IPI	UniProtKB:D3Z7P3	Human	PMID:16899818
Molecular Function	GO:0005515	protein binding	ATCAY	IPI	UniProtKB:O94925	Human	PMID:16899818
Molecular Function	GO:0005515	protein binding	ATCAY	IPI	UniProtKB:P13264	Human	PMID:16899818
Molecular Function	GO:0005515	protein binding	ATCAY	IPI	UniProtKB:P13264	Human	PMID:18628984
Molecular Function	GO:0005515	protein binding	ATCAY	IPI	UniProtKB:Q13526	Human	PMID:18628984
Molecular Function	GO:0005515	protein binding	ATCAY	IPI	UniProtKB:Q07866-2	Human	PMID:32296183
Cellular Component	GO:0030424	axon	Atcay	IDA		Rat	PMID:19861499|RGD:5683640
Cellular Component	GO:0005737	cytoplasm	ATCAY	IDA		Human	PMID:16899818
Cellular Component	GO:0005737	cytoplasm	Atcay	IDA		Rat	PMID:18628984|RGD:8553875
Cellular Component	GO:0030425	dendrite	Atcay	IDA		Rat	PMID:19861499|RGD:5683640
Cellular Component	GO:0031966	mitochondrial membrane	Atcay	IDA		Mouse	MGI:MGI:4398797|PMID:19861499
Cellular Component	GO:0043005	neuron projection	ATCAY	IDA		Human	PMID:16899818
Cellular Component	GO:0043005	neuron projection	Atcay	IDA		Mouse	MGI:MGI:4398797|PMID:19861499
Cellular Component	GO:0044306	neuron projection terminus	Atcay	IDA		Rat	PMID:18628984|RGD:8553875
Cellular Component	GO:0048471	perinuclear region of cytoplasm	Atcay	IDA		Rat	PMID:18628984|RGD:8553875
Cellular Component	GO:0045202	synapse	Atcay	IDA		Rat	PMID:19861499|RGD:5683640
Biological Process	GO:0048311	mitochondrion distribution	Atcay	IMP		Rat	PMID:19861499|RGD:5683640
Biological Process	GO:2000212	negative regulation of glutamate metabolic process	ATCAY	IDA		Human	PMID:16899818
Biological Process	GO:0031175	neuron projection development	Atcay	IDA		Mouse	MGI:MGI:4398797|PMID:19861499
Biological Process	GO:0031175	neuron projection development	Atcay	IMP		Rat	PMID:19861499|RGD:5683640
Biological Process	GO:0032880	regulation of protein localization	ATCAY	IDA		Human	PMID:16899818
Biological Process	GO:0032222	regulation of synaptic transmission, cholinergic	atcaya	IMP	ZFIN:ZDB-MRPHLNO-160107-4	Zfish	PMID:26343454

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern