Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ARPC5L
  • Mouse genes Arpc5l
  • Rat genes Arpc5l,Arpc5l-ps1
  • Zfish genes arpc5la,arpc5lb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Arpc5l

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	ARPC5L	IPI	UniProtKB:P59998	Human	PMID:16169070
Molecular Function	GO:0005515	protein binding	ARPC5L	IPI	UniProtKB:O95257	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	ARPC5L	IPI	UniProtKB:P59998	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	ARPC5L	IPI	UniProtKB:P59998	Human	PMID:26655834
Molecular Function	GO:0005515	protein binding	ARPC5L	IPI	UniProtKB:P59998	Human	PMID:30021884
Molecular Function	GO:0005515	protein binding	ARPC5L	IPI	UniProtKB:O95257	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ARPC5L	IPI	UniProtKB:P59998	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ARPC5L	IPI	UniProtKB:Q6X4W1-2	Human	PMID:32296183
Cellular Component	GO:0070062	extracellular exosome	ARPC5L	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	ARPC5L	HDA		Human	PMID:20458337
Cellular Component	GO:0005925	focal adhesion	ARPC5L	HDA		Human	PMID:21423176
Cellular Component	GO:0098978	glutamatergic synapse	Arpc5l	IDA		Mouse	PMID:24413018
Cellular Component	GO:0098978	glutamatergic synapse	Arpc5l	EXP		Mouse	PMID:24413018
Cellular Component	GO:0045202	synapse	Arpc5l	EXP		Mouse	PMID:24413018
Cellular Component	GO:0045202	synapse	Arpc5l	IDA		Mouse	PMID:24413018

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern