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Gene Expression Data
Assay Details
Assay
Reference: J:133947 Summerhurst K, et al., 3D representation of Wnt and Frizzled gene expression patterns in the mouse embryo at embryonic day 11.5 (Ts19). Gene Expr Patterns. 2008 May;8(5):331-48
Assay type: RNA in situ
MGI Accession ID: MGI:5448411
Gene symbol: Wnt11
Gene name: wingless-type MMTV integration site family, member 11
Probe: Wnt11 cDNA4
Probe preparation: Antisense RNA
Assay notes: These data are obtained from optical projection tomography (OPT).
Results
Specimen 1G: embryonic day 11.5 (more )
Note: Left side is OPT reconstructed data, right side is the corresponding whole-mount in situ hybridized embryo.
Structure Level Pattern Image Note
TS19: embryo Present 1G
Specimen Table 1: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: 1st branchial arch Present
TS19: 2nd branchial arch Present
TS19: 4th branchial arch Present
TS19: body wall Present
TS19: cranial ganglion Present
TS19: cranial nerve Present
TS19: diencephalon Present
TS19: dorsal root ganglion Present
TS19: forelimb bud mesenchyme Present
TS19: fronto-nasal process Present
TS19: handplate apical ectodermal ridge Present
TS19: head mesenchyme Present
TS19: heart Present
TS19: hindbrain Present
TS19: midbrain Present
TS19: tail Present
TS19: telencephalon Present
TS19: inner ear Present Regionally restricted Otic vesicle.
Specimen 3A: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: forelimb bud mesenchyme Present 3A
TS19: handplate apical ectodermal ridge Present 3A
Specimen 3B: embryonic day 11.5 (more )
Note: virtual section
Structure Level Pattern Image Note
TS19: forelimb bud mesenchyme Present 3B
TS19: handplate apical ectodermal ridge Present 3B
Specimen 3C: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: forelimb mesenchyme Present 3C
TS20: hand epithelium Absent 3C Expression is absent in the apical ectodermal ridge.
Specimen 3D: embryonic day 12.5 (more )
Note: virtual section
Structure Level Pattern Image Note
TS20: forelimb mesenchyme Present 3D
TS20: hand epithelium Absent 3D Expression is absent in the apical ectodermal ridge.
Specimen 5 first: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: forelimb bud mesenchyme Present 5_Wnt11 first
Specimen 5 second: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: forelimb bud mesenchyme Present 5_Wnt11 second
Specimen 5 third: embryonic day 11.5 (more )
Note: virtual section
Structure Level Pattern Image Note
TS19: forelimb bud mesenchyme Present 5_Wnt11 third
Specimen 5 fourth: embryonic day 11.5 (more )
Note: virtual section
Structure Level Pattern Image Note
TS19: forelimb bud mesenchyme Present 5_Wnt11 fourth
Specimen 5 fifth: embryonic day 11.5 (more )
Note: virtual section
Structure Level Pattern Image Note
TS19: forelimb bud mesenchyme Present 5_Wnt11 fifth
Specimen 5 sixth: embryonic day 11.5 (more )
Note: virtual section
Structure Level Pattern Image Note
TS19: apical ectodermal ridge Present 5_Wnt11 sixth
TS19: forelimb bud mesenchyme Present 5_Wnt11 sixth
Specimen 5 seventh: embryonic day 11.5 (more )
Note: virtual section
Structure Level Pattern Image Note
TS19: apical ectodermal ridge Present Regionally restricted 5_Wnt11 seventh Expression is in the most distal part.
TS19: forelimb bud mesenchyme Present Regionally restricted 5_Wnt11 seventh Expression is in the most distal part.
Specimen Table 2: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: handplate apical ectodermal ridge Present
TS19: forelimb bud mesenchyme Present Complex pattern.
Specimen Table S1: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: head mesenchyme Present Regionally restricted Expression is between hindbrain and forebrain levels in two columns and in mesenchyme around the eyes.
TS19: hindbrain Present Regionally restricted There are two columns of expression in mid part of hindbrain at the level of the otic vesicle.
TS19: forebrain Present Regionally restricted Expression is in the ventricular surface.
TS19: midbrain Present Regionally restricted Expression is in the ventricular surface.
TS19: dermomyotome Present
TS19: handplate apical ectodermal ridge Present
TS19: infundibular recess of 3rd ventricle Present
TS19: notochord Present
TS19: pericardium Present
TS19: branchial arch mesenchyme Present Patchy
TS19: inner ear Present Regionally restricted Otic vesicle.
TS19: dorsal root ganglion Present Regionally restricted Most anterior ganglia.
TS19: trunk mesenchyme Present Regionally restricted Lateral mesenchyme patch at base of heart level of very anterior of forelimb and in lateral mesenchyme extending into 4th branchial arch.
TS19: trunk Present Regionally restricted Expression is in a lateral line between limbs and in a ventrolateral line along the edge of the posterior trunk and tail- posterior to hindlimb buds.
TS19: body wall Present Regionally restricted Body wall around the heart.
TS19: neural tube Present Regionally restricted Expression is ventral.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
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