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Gene Expression Data
Assay Details
Assay
Reference: J:98919 Cobb J, et al., Comparative analysis of genes downstream of the Hoxd cluster in developing digits and external genitalia. Development. 2005 Jul;132(13):3055-67
Assay type: RNA in situ
MGI Accession ID: MGI:5315127
Gene symbol: Pcdha
Gene name: protocadherin alpha cluster
Probe: Pcdha cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen S4D Wild type left: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: forelimb digit 5 Present Regionally restricted S4D Wild type - Left column There is a spot of expression at the base of the digit.
Specimen S4D HoxD Del1-13 left: embryonic day 12.5; Del(2Hoxd1-Hoxd13)1Ddu/Del(2Hoxd1-Hoxd13)1Ddu (more )
Structure Level Pattern Image Note
TS20: forelimb digit 5 Present Regionally restricted S4D HoxD Del1-13 - Left column There is a spot of expression at the base of the digit; it might be darker in the mutant compared to wild-type.
Specimen S4D Wild type right: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: genital tubercle Present S4D Wild type - Right column
Specimen S4D HoxD Del1-13 right: embryonic day 14.5; Del(2Hoxd1-Hoxd13)1Ddu/Del(2Hoxd1-Hoxd13)1Ddu (more )
Structure Level Pattern Image Note
TS22: genital tubercle Absent S4D HoxD Del1-13 - Right column Expression was lost in 3 of 3 mutant specimens.
Specimen not shown: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: genital tubercle Present
Specimen not shown: embryonic day 13.5; Del(2Hoxd1-Hoxd13)1Ddu/Del(2Hoxd1-Hoxd13)1Ddu (more )
Structure Level Pattern Image Note
TS21: genital tubercle Absent Expression was lost in 3 of 3 mutant specimens.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/14/2024
MGI 6.23 		The Jackson Laboratory