About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:142567 Capellini TD, et al., Conservation of notochord gene expression across chordates: insights from the Leprecan gene family. Genesis. 2008 Nov;46(11):683-96
Assay type: RNA in situ
MGI Accession ID: MGI:5295413
Gene symbol: P3h3
Gene name: prolyl 3-hydroxylase 3
Probe: Leprel2Sma probe
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 5a: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: forelimb bud Weak 5a
TS15: hindlimb ridge Weak 5a
TS15: 1st branchial arch Present 5a
TS15: branchial arch Weak 5a There is weak expression in anterior craniofacial/branchial arch tissue.
TS15: head Weak 5a There is weak expression in anterior craniofacial/branchial arch tissue.
TS15: embryo ectoderm Weak 5a There is weak expression in ectodermal tissue.
TS15: otocyst Absent 5a There is no expression in the otic capsule.

Specimen 5b: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: notochord Present 5b
TS15: paraxial mesenchyme Present 5b
TS15: branchial arch Weak 5b There is weak expression in anterior craniofacial/branchial arch tissue.
TS15: head Weak 5b There is weak expression in anterior craniofacial/branchial arch tissue.
TS15: embryo ectoderm Weak 5b There is weak expression in ectodermal tissue.
TS15: otocyst Absent 5b There is no expression in the otic capsule.

Specimen 5d: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: forelimb bud Weak 5d
TS17: hindlimb bud Weak 5d
TS17: 1st branchial arch Present 5d
TS17: paraxial mesenchyme Present 5d
TS17: 1st branchial arch maxillary component Weak 5d
TS17: fronto-nasal process Weak 5d

Specimen 5e/f: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: notochord Present 5e , 5f Expression is present in the anterior notochord.

Specimen 5g: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: paraxial mesenchyme Present 5g

Specimen 5h: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: paraxial mesenchyme Present 5h

Specimen 5j: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: embryo Present 5j Expression is markedly reduced across all axial levels compared to earlier gestational times.
TS19: forelimb bud Present 5j
TS19: hindlimb bud Present 5j
TS19: branchial arch Present 5j
TS19: fronto-nasal process Present 5j Expression is present in frontal nasal tissues.
TS19: paraxial mesenchyme Present 5j Expression is waning along the rostral-caudal axis.

Specimen 5k/l: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: notochord Absent 5l , 5k There is no expression in the anterior domains.

Specimen 5m/n: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: notochord Trace Regionally restricted 5m , 5n There is minimal expression in caudal domains at the level of the hindlimb bud.

Specimen 6a' E10.5: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: notochord Present 6a' Leprecan-like2 E10.5 Inset shows higher magnification of staining in the notochord.

Specimen 6a' E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: notochord Present 6a' Leprecan-like2 E11.5
TS19: dorsal root ganglion Present 6a' Leprecan-like2 E11.5
TS19: neural tube floor plate Present 6a' Leprecan-like2 E11.5

Specimen 6a' E12.5: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: notochord Present 6a' Leprecan-like2 E12.5
TS20: dorsal root ganglion Present 6a' Leprecan-like2 E12.5
TS20: spinal cord floor plate Present 6a' Leprecan-like2 E12.5

Specimen 6a' E13.5: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: embryo Present Regionally restricted 6a' Leprecan-like2 E13.5 Expression is present in the notochord.

Specimen 6b'n: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: forelimb pre-cartilage condensation Present 6b'n Expression is present in the cartilage of the proximal forelimb.

Specimen 6b'o: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: mandibular process mesenchyme Present 6b'o

Specimen 6b'p: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: eye Present 6b'p

Specimen 6b'q: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: olfactory epithelium Present 6b'q

Specimen 6b'r: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: hindlimb Present 6b'r

Specimen 6b's: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: vertebral cartilage condensation Present Regionally restricted 6b's Expression is present in the neural arch cartilages.
TS21: dorsal root ganglion Present 6b's

Specimen 6b't: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: renal medulla Present Regionally restricted 6b't Expression is present in epithelial cells lining the future ureteric ducts. Shown at higher magnification in the red inset.
TS21: mesenchyme of metanephros Present 6b't Expression is present in the nephrogenic mesenchyme of the developing kidney. Shown at higher magnification in the blue inset.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
05/07/2024
MGI 6.23
The Jackson Laboratory