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Phenotypes associated with this allele
Allele Symbol
Allele Name
Allele ID
Pax9tm1.1Hpt
targeted mutation 1.1, Heiko Peters
MGI:3723638
Summary 5 genotypes
Jump to Allelic Composition Genetic Background Genotype ID
hm1
Pax9tm1.1Hpt/Pax9tm1.1Hpt involves: 129S2/SvPas * C57BL/6 * SJL MGI:3723639
cn2
Isl1tm1(cre)Sev/Isl1+
Pax9tm1Rbal/Pax9tm1.1Hpt
involves: 129 * C57BL/6J MGI:7294563
cn3
Isl1tm1(cre)Sev/Isl1+
Msx1tm1Rilm/Msx1+
Pax9tm1Rbal/Pax9tm1.1Hpt
involves: 129 * CD-1 MGI:7294564
cn4
Pax9tm1.1Hpt/Pax9tm1.1Hpt
Tg(Pgk1-cre)1Lni/?
involves: 129S2/SvPas * BALB/c * C57BL/6 * SJL MGI:3723640
cn5
Pax9tm1.1Hpt/Pax9tm1.1Hpt
H2az2Tg(Wnt1-cre)11Rth/H2az2+
involves: 129S2/SvPas * C57BL/6 * CBA * SJL MGI:3723641


Genotype
MGI:3723639
hm1
Allelic
Composition
Pax9tm1.1Hpt/Pax9tm1.1Hpt
Genetic
Background
involves: 129S2/SvPas * C57BL/6 * SJL
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Pax9tm1.1Hpt mutation (0 available); any Pax9 mutation (16 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
normal phenotype
• mice are fertile and indistinguishable from wild-type




Genotype
MGI:7294563
cn2
Allelic
Composition
Isl1tm1(cre)Sev/Isl1+
Pax9tm1Rbal/Pax9tm1.1Hpt
Genetic
Background
involves: 129 * C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Isl1tm1(cre)Sev mutation (1 available); any Isl1 mutation (33 available)
Pax9tm1.1Hpt mutation (0 available); any Pax9 mutation (16 available)
Pax9tm1Rbal mutation (0 available); any Pax9 mutation (16 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
cardiovascular system
• absent common carotid arteries in 9 of 9 mice
• in 1 of 9 mice

craniofacial
N
• unlike in germline null mice, cleft palate is not seen

endocrine/exocrine glands
• hypoplastic and absent from the normal position
• hypoplastic and absent from the normal position

hematopoietic system
• hypoplastic and absent from the normal position
• hypoplastic and absent from the normal position

immune system
• hypoplastic and absent from the normal position
• hypoplastic and absent from the normal position

limbs/digits/tail




Genotype
MGI:7294564
cn3
Allelic
Composition
Isl1tm1(cre)Sev/Isl1+
Msx1tm1Rilm/Msx1+
Pax9tm1Rbal/Pax9tm1.1Hpt
Genetic
Background
involves: 129 * CD-1
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Isl1tm1(cre)Sev mutation (1 available); any Isl1 mutation (33 available)
Msx1tm1Rilm mutation (1 available); any Msx1 mutation (18 available)
Pax9tm1.1Hpt mutation (0 available); any Pax9 mutation (16 available)
Pax9tm1Rbal mutation (0 available); any Pax9 mutation (16 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging

skeleton
• ossification center is shorter
• angle between the greater and lesser horns is reduced

craniofacial
• unlike in germline null mice, cleft palate is not seen
• ossification center is shorter
• angle between the greater and lesser horns is reduced

limbs/digits/tail

cardiovascular system
• cervical origin in 2 of 8 neonates

respiratory system




Genotype
MGI:3723640
cn4
Allelic
Composition
Pax9tm1.1Hpt/Pax9tm1.1Hpt
Tg(Pgk1-cre)1Lni/?
Genetic
Background
involves: 129S2/SvPas * BALB/c * C57BL/6 * SJL
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Pax9tm1.1Hpt mutation (0 available); any Pax9 mutation (16 available)
Tg(Pgk1-cre)1Lni mutation (1 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging

craniofacial
• the palatal processes of the maxilla is displaced laterally
• the palatal processes of the palatine is displaced laterally
• mice are born with cleft secondary palate

endocrine/exocrine glands
• mice are born with missing thymic lobes

hearing/vestibular/ear
• mice are born with a hypoplastic tympanic ring

limbs/digits/tail
• mice are born with preaxial digit duplication

hematopoietic system
• mice are born with missing thymic lobes

behavior/neurological
• mice die with no evidence of feeding

skeleton
• the palatal processes of the maxilla is displaced laterally
• the palatal processes of the palatine is displaced laterally

immune system
• mice are born with missing thymic lobes

digestive/alimentary system
• the palatal processes of the maxilla is displaced laterally
• the palatal processes of the palatine is displaced laterally
• mice are born with cleft secondary palate

growth/size/body
• the palatal processes of the maxilla is displaced laterally
• the palatal processes of the palatine is displaced laterally
• mice are born with cleft secondary palate




Genotype
MGI:3723641
cn5
Allelic
Composition
Pax9tm1.1Hpt/Pax9tm1.1Hpt
H2az2Tg(Wnt1-cre)11Rth/H2az2+
Genetic
Background
involves: 129S2/SvPas * C57BL/6 * CBA * SJL
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
H2az2Tg(Wnt1-cre)11Rth mutation (2 available); any H2az2 mutation (26 available)
Pax9tm1.1Hpt mutation (0 available); any Pax9 mutation (16 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging

craniofacial
• tooth development is arrested at the bud stage
• the palatal processes of the maxilla is displaced laterally
• the palatal processes of the palatine is displaced laterally

behavior/neurological
• mice die with no evidence of feeding

digestive/alimentary system
• the palatal processes of the maxilla is displaced laterally
• the palatal processes of the palatine is displaced laterally

skeleton
• tooth development is arrested at the bud stage
• the palatal processes of the maxilla is displaced laterally
• the palatal processes of the palatine is displaced laterally

growth/size/body
• tooth development is arrested at the bud stage
• the palatal processes of the maxilla is displaced laterally
• the palatal processes of the palatine is displaced laterally





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last database update
05/07/2024
MGI 6.23
The Jackson Laboratory