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Phenotypes associated with this allele
Allele Symbol
Allele Name
Allele ID
Emx1tm1(cre)Yql
targeted mutation 1, Yuqing Li
MGI:2176219
Summary 9 genotypes
Jump to Allelic Composition Genetic Background Genotype ID
hm1
Emx1tm1(cre)Yql/Emx1tm1(cre)Yql involves: 129S2/SvPas * C57BL/6 MGI:2179804
cn2
Ctnnb1tm2Kem/Ctnnb1tm2Kem
Emx1tm1(cre)Yql/Emx1+
B6.129-Emx1tm1(cre)Yql Ctnnb1tm2Kem MGI:3054987
cn3
Emx1tm1(cre)Yql/Emx1+
Lhx2tm1Monu/Lhx2tm1Monu
involves: 129P2/OlaHsd * 129S2/SvPas MGI:3772185
cn4
Arhgef9tm1Betz/Y
Emx1tm1(cre)Yql/Emx1+
involves: 129P2/OlaHsd * 129S2/SvPas * C57BL/6 MGI:3820316
cn5
Fgf13tm1Xuzh/Y
Emx1tm1(cre)Yql/Emx1+
involves: 129S2/SvPas MGI:5433296
cn6
Emx1tm1(cre)Yql/Emx1+
Tor1atm2Yql/Tor1atm2Yql
involves: 129S2/SvPas * 129S4/SvJae * C57BL/6 MGI:3772569
cn7
Btbd9tm1c(EUCOMM)Wtsi/Btbd9tm1c(EUCOMM)Wtsi
Emx1tm1(cre)Yql/Emx1+
involves: 129S2/SvPas * 129S4/SvJaeSor * C57BL/6N MGI:6488233
cn8
Cdyltm1.1Yuw/Cdyltm1.1Yuw
Emx1tm1(cre)Yql/Emx1+
involves: 129S2/SvPas * C57BL/6 MGI:6121112
cn9
Tmem169em2Cya/Tmem169em2Cya
Emx1tm1(cre)Yql/Emx1+
involves: 129S2/SvPas * C57BL/6J MGI:8168970


Genotype
MGI:2179804
hm1
Allelic
Composition
Emx1tm1(cre)Yql/Emx1tm1(cre)Yql
Genetic
Background
involves: 129S2/SvPas * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Emx1tm1(cre)Yql mutation (0 available); any Emx1 mutation (30 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• Background Sensitivity: the absence of a corpus collosum was noted on a segregating 129/Sv x C57BL/6 genetic background; however, no such phenotype was reported when the mutation was made congenic on a C57BL/6 background




Genotype
MGI:3054987
cn2
Allelic
Composition
Ctnnb1tm2Kem/Ctnnb1tm2Kem
Emx1tm1(cre)Yql/Emx1+
Genetic
Background
B6.129-Emx1tm1(cre)Yql Ctnnb1tm2Kem
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Ctnnb1tm2Kem mutation (1 available); any Ctnnb1 mutation (47 available)
Emx1tm1(cre)Yql mutation (0 available); any Emx1 mutation (30 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
behavior/neurological
• females display poor nursing behavior
• 80% do not nurse at all and abandon pups
• seizures can be induced by handling in 4 month old animals
• increased sensitivity to PTZ induced seizures
• 83% die within 60 minutes of PTZ injection compared to 58% mortality in controls
• significantly higher numbers of phase I and phase II seizures
• duration of seizures increased for phase I
• 2X as much time in seizure as controls

growth/size/body
• males significantly smaller than littermates

reproductive system

nervous system
• seizures can be induced by handling in 4 month old animals
• increased sensitivity to PTZ induced seizures
• 83% die within 60 minutes of PTZ injection compared to 58% mortality in controls
• significantly higher numbers of phase I and phase II seizures
• duration of seizures increased for phase I
• 2X as much time in seizure as controls
• as a result of missing hippocampal structures
• lack hippocampal commissure
• CA1, CA2, CA3 all not detected
• impaired cortical development, failure of lobes to extend caudally
• adult brain similar in appearance to perinatal brain
• thinner cortex




Genotype
MGI:3772185
cn3
Allelic
Composition
Emx1tm1(cre)Yql/Emx1+
Lhx2tm1Monu/Lhx2tm1Monu
Genetic
Background
involves: 129P2/OlaHsd * 129S2/SvPas
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Emx1tm1(cre)Yql mutation (0 available); any Emx1 mutation (30 available)
Lhx2tm1Monu mutation (0 available); any Lhx2 mutation (11 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• mice exhibit subtle to inapparent abnormalities in the cortical hem at E12.5




Genotype
MGI:3820316
cn4
Allelic
Composition
Arhgef9tm1Betz/Y
Emx1tm1(cre)Yql/Emx1+
Genetic
Background
involves: 129P2/OlaHsd * 129S2/SvPas * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Arhgef9tm1Betz mutation (0 available); any Arhgef9 mutation (8 available)
Emx1tm1(cre)Yql mutation (0 available); any Emx1 mutation (30 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• strong reduction in gephyrin cluster numbers in the hippocampus at P40, P60 and P130
• however, clustering is unaffected in other areas of the brain




Genotype
MGI:5433296
cn5
Allelic
Composition
Fgf13tm1Xuzh/Y
Emx1tm1(cre)Yql/Emx1+
Genetic
Background
involves: 129S2/SvPas
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Emx1tm1(cre)Yql mutation (0 available); any Emx1 mutation (30 available)
Fgf13tm1Xuzh mutation (0 available); any Fgf13 mutation (12 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
behavior/neurological
• in a Morris water maze
• in a Morris water maze
• increased depression-like behavior
• mice exhibit increased latency to feed in a novelty suppressed feed test compared with wild-type mice
• slight

nervous system
• at E18, Cux1+ neurons are mislocalized in the deep layers of the lateral somatosensory cortex compared to in wild-type mice
• most cultured cortical neurons remain multipolar shape unlike control neurons
• axonal branching in the somatosensory cortex and the corticothalamic tracts is increased compared with control mice




Genotype
MGI:3772569
cn6
Allelic
Composition
Emx1tm1(cre)Yql/Emx1+
Tor1atm2Yql/Tor1atm2Yql
Genetic
Background
involves: 129S2/SvPas * 129S4/SvJae * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Emx1tm1(cre)Yql mutation (0 available); any Emx1 mutation (30 available)
Tor1atm2Yql mutation (0 available); any Tor1a mutation (22 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
behavior/neurological
• on a beam-walking test, 71% of mice exhibit more falls than wild-type mice
• however, mice perform normally in a rotarod test
• the hind base of male mice is smaller than in wild-type mice
• mice exhibit hyperactivity in an open-field test

nervous system
N
• the cerebral cortex and dopamine metabolite levels are normal




Genotype
MGI:6488233
cn7
Allelic
Composition
Btbd9tm1c(EUCOMM)Wtsi/Btbd9tm1c(EUCOMM)Wtsi
Emx1tm1(cre)Yql/Emx1+
Genetic
Background
involves: 129S2/SvPas * 129S4/SvJaeSor * C57BL/6N
Cell Lines EPD0631_3_A09
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Btbd9tm1c(EUCOMM)Wtsi mutation (0 available); any Btbd9 mutation (51 available)
Emx1tm1(cre)Yql mutation (0 available); any Emx1 mutation (30 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
behavior/neurological
• mice exhibit a 219% increase of slips in the beam walking test
• however, mice do not show a deficit in the rotarod test
• in the continuous open field test, mice show an increase in activity level during the light phase but not dark phase indicating a rest-phase specific motor restlessness
• however, mice exhibit a similar level of total distance traveled in a 30 min open field test as controls and similar wheel running activity during both the light and dark phase as in controls
• sleep analysis indicates an increased probability of waking in the light phase but not dark phase
• mice exhibit lower sensitivity to the heat stimuli than controls in the tail-flick test, indicating decreased thermal sensory perception

nervous system
• mice exhibit thinner cortical layers in the posterior primary motor cortex
• mice exhibit thinner cortical layers in both the anterior and posterior part of the primary somatosensory cortex representing the hindlimb

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
restless legs syndrome DOID:0050425 OMIM:PS102300
J:282582




Genotype
MGI:6121112
cn8
Allelic
Composition
Cdyltm1.1Yuw/Cdyltm1.1Yuw
Emx1tm1(cre)Yql/Emx1+
Genetic
Background
involves: 129S2/SvPas * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Cdyltm1.1Yuw mutation (0 available); any Cdyl mutation (71 available)
Emx1tm1(cre)Yql mutation (0 available); any Emx1 mutation (30 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
behavior/neurological
N
• behavior in Morris water maze, elevated plus maze, open field and context-dependent and cue-dependent fear conditioning tests
• locomotor behavior in Morris water maze, elevated plus maze and open field tests
• significantly lower cumulative doses of PTZ and latency to induce onset of generalized tonic-clonic seizures with pentylenetetrazol (PTZ)-induced seizures
• significantly longer intervals between minimal and tonic-clonic seizures with pentylenetetrazol (PTZ)-induced seizures

cellular
• many cells positive for Cux1 (marker for cerebral cortex layers II-IV) remained in the intermediate zone (IZ) at age P2

nervous system
• significantly lower cumulative doses of PTZ and latency to induce onset of generalized tonic-clonic seizures with pentylenetetrazol (PTZ)-induced seizures
• significantly longer intervals between minimal and tonic-clonic seizures with pentylenetetrazol (PTZ)-induced seizures
• many cells positive for Cux1 (marker for cerebral cortex layers II-IV) remained in the intermediate zone (IZ) at age P2

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
epilepsy DOID:1826 J:251551




Genotype
MGI:8168970
cn9
Allelic
Composition
Tmem169em2Cya/Tmem169em2Cya
Emx1tm1(cre)Yql/Emx1+
Genetic
Background
involves: 129S2/SvPas * C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Emx1tm1(cre)Yql mutation (0 available); any Emx1 mutation (30 available)
Tmem169em2Cya mutation (1 available); any Tmem169 mutation (11 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
N
• at E16 and P0, mice exhibit normal overall structure of the cerebral cortex, with no significant differences in cortical thickness, corpus callosum and hippocampus morphology, or cortical layer organization relative to control mice
• no defects in cortical neuron migration are noted at P0; both neural stem cells and intermediate progenitor cells show norma proliferation patterns at E16; no change in the number of TUNEL+ apoptotic cells is noted in the cortex at E17.5
• critical synaptic proteins, including NMDA receptor subunits GRIN1, GRIN2A and GRIN2B, are downregulated in the cerebral cortex of 2-month-old mice
• postsynaptic scaffold proteins DLG4 (also known as PSD95), SHANK3, and HOMER1 are downregulated in isolated synaptic fractions of the neocortex
• E16 and P0 brain slices show abnormal Map2 and Tubb3 (also known as Tuj1) staining patterns with fragmented longitudinal stripes substantially different from control patterns
• in vitro differentiation of dissociated E16 cortical neurons shows impaired neuronal process development, with a significant reduction in neurite length
• Golgi-Coxstained cortical sections from P20- or 2-month-old mice show a significant reduction in apical dendrite length
• Golgi-Coxstained apical dendrites in the cerebral cortex and hippocampus of P20- or 2-month-old mice show a significant reduction in dendritic spine density on apical dendrites
• EM analysis of synapses in the prefrontal cortex of 2- to 4-month-old mice shows a significant reduction in both the length and thickness of the postsynaptic density
• spontaneous glutamatergic excitatory postsynaptic currents (sEPSCs) of prefrontal cortex pyramidal neurons from P15- to P20-old mice show a significant increase in sEPSC peak amplitude
• however, no change in sEPSC amplitude is seen in prefrontal cortex slices from 4-month-old mice, suggesting that the effects on neuronal synaptic network activity may vary at different developmental stages
• whole-cell voltage-clamp recordings of spontaneous glutamatergic excitatory postsynaptic currents (sEPSCs) show a significant decrease in sEPSC frequency of pyramidal neurons in prefrontal cortex slices from 4-month-old mice
• sEPSCs of prefrontal cortex pyramidal neurons from P15- to P20-old mice show a significant increase in sEPSC frequency
• average paired-pulse ratio (PPR) of evoked EPSCs is significantly increased at interpulse intervals of 25, 50, and 100 ms in prefrontal cortex pyramidal neurons from 2-month-old mice
• however, no change in average PPR is seen in pyramidal neurons from P15- to P20-old mice

behavior/neurological
N
• mice show normal memory and cognition in the Morris water maze and novel object recognition test, normal instinctive behavior in a nest building test, and unaffected motor coordination/balance abilities in a balance beam test
• in an open-field assay, mice spend less time in the central area and more time in the peripheral areas, with no significant change in total distance traveled or mean speed relative to controls
• however, in an elevated plus maze test, mice show only a small (non-significant) decrease in the percentage of time spent in the open arm
• during stage 3 of a three-chamber test, mice show no preference for a novel stranger mouse (stranger 2), indicating impaired preference for social novelty
• mice show increased self-grooming duration and frequency relative to controls
• in a marble burying test, mice show increased marble burying behavior relative to control mice
• in a self-grooming test, mice show increased self-grooming duration and frequency during the 10 min free movement session
• in a reciprocal social interactions test, 2- to 3-month-old mice spend significantly less time interacting with a newly introduced mouse than controls
• during stage 2 of a three-chamber test, mice spend more time in the empty compartment than exploring a stranger mouse (stranger 1), suggesting impaired social interaction





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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory