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Rny1 Gene Detail
Summary
  • Symbol
    Rny1
  • Name
    RNA, Y1 small cytoplasmic, Ro-associated
Location &
Maps
more
  • Sequence Map
    Chr6:47765004-47765114 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 22.94 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    85 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_97995
 scRNA gene Chr6:47765003-47765114 (-)
129S1/SvImJ ENSMUSG00200005278
 unclassified non-coding RNA gene Chr6:44668745-44668856 (-)
A/J ENSMUSG00195006819
 unclassified non-coding RNA gene Chr6:44476332-44476443 (-)
AKR/J ENSMUSG00220004667
 unclassified non-coding RNA gene Chr6:44178499-44178610 (-)
BALB/cJ ENSMUSG00180023444
 unclassified non-coding RNA gene Chr6:44781992-44782103 (-)
C3H/HeJ ENSMUSG00175017269
 unclassified non-coding RNA gene Chr6:44550751-44550862 (-)
C57BL/6NJ ENSMUSG00215012152
 unclassified non-coding RNA gene Chr6:44713781-44713892 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005005073
 unclassified non-coding RNA gene Chr6:44078480-44078591 (-)
CBA/J ENSMUSG00210018708
 unclassified non-coding RNA gene Chr6:44595614-44595725 (-)
DBA/2J ENSMUSG00185014016
 unclassified non-coding RNA gene Chr6:45177085-45177196 (-)
FVB/NJ ENSMUSG00205031182
 unclassified non-coding RNA gene Chr6:44836326-44836437 (-)
JF1/MsJ ENSUMUG00000013013
 unclassified non-coding RNA gene Chr6:44560329-44560440 (-)
LP/J ENSMUSG00230020970
 unclassified non-coding RNA gene Chr6:46165960-46166071 (-)
NOD/ShiLtJ ENSMUSG00190039490
 unclassified non-coding RNA gene Chr6:44515643-44515754 (-)
NZO/HlLtJ ENSMUSG00225018930
 unclassified non-coding RNA gene Chr6:48202447-48202558 (-)
PWK/PhJ ENSLUMG00010022929
 unclassified non-coding RNA gene Chr6:44179960-44180071 (-)
SPRET/EiJ ENSMSPG00010010526
 unclassified non-coding RNA gene Chr6:44817590-44817701 (-)
WSB/EiJ ENSIUOG00005027862
 unclassified non-coding RNA gene Chr6:44799771-44799882 (-)



Homology
more
  • Human Ortholog
    RNY1, RNA, Ro60-associated Y1
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RNY1, RNA, Ro60-associated Y1
  • Synonyms
    HY1, Y1
  • Links
    NCBI Gene ID: 6084

  • Chr Location
    7q36.1; chr7:148987136-148987248 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 19872 NCBI Gene Model | MGI Sequence Detail 111 C57BL/6J ±  kb
transcript NR_004419 RefSeq | MGI Sequence Detail 111 C3H/An  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    Genomic 3
    cDNA 1

    Microarray probesets 1
Other
Accession IDs
less
MGD-MRK-14004
References
more
  • Summaries
    All 11
    Phenotypes 1
  • Earliest
    J:17937 Crouch D, et al., The molecular cloning of a mouse Ro RNA, my1-like sequence. Nucleic Acids Res. 1989 Jun 26;17(12):4890
  • Latest
    J:153140 Krude T, et al., Y RNA functions at the initiation step of mammalian chromosomal DNA replication. J Cell Sci. 2009 Aug 15;122(Pt 16):2836-45
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory