About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:171281 Nakagawa S, et al., Paraspeckles are subpopulation-specific nuclear bodies that are not essential in mice. J Cell Biol. 2011 Apr 4;193(1):31-9
Assay type: RNA in situ
MGI Accession ID: MGI:5770404
Gene symbol: Neat1
Gene name: nuclear paraspeckle assembly transcript 1 (non-protein coding)
Probe: NEAT1_2 probe
Probe preparation: labelled with fluorescein
Results
Specimen 2C (3rd row): postnatal adult (more )
Note: Surface epithelial cells. Double labeled: green - NEAT1 (long probe); pink - Sfpq (PSF; assay MGI:5770412).
Structure Level Pattern Image Note
TS28: stomach epithelium Present Regionally restricted 2C NEAT1_2 (3rd row) , 2C merge (3rd row) Expression concentrated in discrete large foci in surface epithelial cells.
Specimen 2D (3rd row): postnatal adult (more )
Note: Parietal cells. Double labeled: green - NEAT1 (long probe); pink - Sfpq (PSF; assay MGI:5770412).
Structure Level Pattern Image Note
TS28: stomach epithelium Weak Regionally restricted 2D NEAT1_2 (3rd row) , 2D merge (3rd row) Gastric cells deeper in the epithelium, such as parietal cells, lack strong expression. Occasional strongly expressing cells in the deep layer.
Specimen 4D WT esophagus: postnatal adult (more )
Note: Double labeled: green - NEAT1 (long probe); pink - Sfpq (PSF; assay MGI:5770412).
Structure Level Pattern Image Note
TS28: esophagus epithelium Weak Regionally restricted 4D WT esophagus NEAT1_2 , 4D WT esophagus (merge)
Specimen 4D KO esophagus: postnatal adult; Neat1tm1.1Shna/Neat1tm1.1Shna (more )
Note: Double labeled: green - NEAT1 (long probe); pink - Sfpq (PSF; assay MGI:5770412).
Structure Level Pattern Image Note
TS28: esophagus epithelium Absent 4D KO esophagus (merge) , 4D KO esophagus NEAT1_2
Specimen 4D WT forestomach: postnatal adult (more )
Note: Double labeled: green - NEAT1 (long probe); pink - Sfpq (PSF; assay MGI:5770412).
Structure Level Pattern Image Note
TS28: stomach proventricular region epithelium Weak Regionally restricted 4D WT forestomach NEAT1_2 , 4D WT forestomach (merge)
Specimen 4D KO forestomach: postnatal adult; Neat1tm1.1Shna/Neat1tm1.1Shna (more )
Note: Double labeled: green - NEAT1 (long probe); pink - Sfpq (PSF; assay MGI:5770412).
Structure Level Pattern Image Note
TS28: stomach proventricular region epithelium Absent 4D KO forestomach NEAT1_2 , 4D KO forestomach (merge)
Specimen 4D WT s. epithelium: postnatal adult (more )
Note: Double labeled: green - NEAT1 (long probe); pink - Sfpq (PSF; assay MGI:5770412).
Structure Level Pattern Image Note
TS28: stomach epithelium Weak Regionally restricted 4D WT s. epithelium NEAT1_2 , 4D WT s. epitehlium (merge)
Specimen 4D KO s. epithelium: postnatal adult; Neat1tm1.1Shna/Neat1tm1.1Shna (more )
Note: Double labeled: green - NEAT1 (long probe); pink - Sfpq (PSF; assay MGI:5770412).
Structure Level Pattern Image Note
TS28: stomach epithelium Absent 4D KO s. epithelium NEAT1_2 , 4D KO s. epithelium (merge)
Specimen S2A (3rd row): postnatal adult (more )
Note: Double labeled: green - NEAT1 (long probe); pink - Sfpq (PSF; assay MGI:5770412).
Structure Level Pattern Image Note
TS28: liver Present S2A merge (3rd row) , S2A NEAT1_2 (3rd row) Authors state expression levels were highly variable between in animals in certain tissues such as liver.
Specimen S2B (3rd row): postnatal adult (more )
Note: Double labeled: green - NEAT1 (long probe); pink - Sfpq (PSF; assay MGI:5770412).
Structure Level Pattern Image Note
TS28: liver Present S2B NEAT1_2 (3rd row) , S2B merge (3rd row) Authors state expression levels were highly variable between in animals in certain tissues such as liver.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory