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Igkv4-54 Gene Detail
Summary
  • Symbol
    Igkv4-54
  • Name
    immunoglobulin kappa chain variable 4-54
Location &
Maps
more
  • Sequence Map
    Chr6:69608632-69609162 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 31.56 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    85 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5009821
 gene segment Chr6:69608632-69609162 (-)
129S1/SvImJ ENSMUSG00200013681
 gene segment Chr6:66515119-66515651 (-)
A/J ENSMUSG00195044887
 gene segment Chr6:66268049-66268581 (-)
AKR/J ENSMUSG00220047163
 gene segment Chr6:65299247-65299776 (-)
BALB/cJ ENSMUSG00180041510
 gene segment Chr6:66623917-66624449 (-)
C3H/HeJ ENSMUSG00175013488
 gene segment Chr6:110825862-110826394 (+)
C57BL/6NJ ENSMUSG00215043116
 gene segment Chr6:66598468-66599000 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005038652
 gene segment Chr6:66794415-66794941 (-)
CBA/J ENSMUSG00210039515
 gene segment Chr6:66421282-66421814 (-)
DBA/2J ENSMUSG00185044572
 gene segment Chr6:66986493-66987025 (-)
FVB/NJ ENSMUSG00205035467
 gene segment Chr6:65964955-65965487 (-)
JF1/MsJ ENSUMUG00000040591
 gene segment Chr6:65968715-65969243 (-)
LP/J ENSMUSG00230028787
 gene segment Chr6:68106806-68107338 (-)
NOD/ShiLtJ ENSMUSG00190041954
 gene segment Chr6:65909497-65910025 (-)
NZO/HlLtJ ENSMUSG00225020455
 gene segment Chr6:70080681-70081213 (-)
PWK/PhJ ENSLUMG00010023589
 gene segment Chr6:65240934-65241465 (-)
SPRET/EiJ ENSMSPG00010031572
 gene segment Chr6:67420325-67420858 (-)
WSB/EiJ ENSIUOG00005025658
 gene segment Chr6:67252069-67252602 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 385291 NCBI Gene Model | MGI Sequence Detail 531 C57BL/6J ±  kb
polypeptide A0A0G2JES9 UniProt | EBI | MGI Sequence Detail 117 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR003599 Immunoglobulin domain subtype
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR050150 Immunoglobulin Variable Light Chain
    IPR013106 Immunoglobulin V-set domain
References
more
  • Summaries
    All 4
  • Earliest
    J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory