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Pate1 Gene Detail
Summary
  • Symbol
    Pate1
  • Name
    prostate and testis expressed 1
  • Synonyms
    Gm17252
Location &
Maps
more
  • Sequence Map
    Chr9:35596375-35598686 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 20.39 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    121 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4936886
 protein coding gene Chr9:35596182-35598686 (-)
129S1/SvImJ ENSMUSG00200037693
 protein coding gene Chr9:32575429-32577720 (-)
A/J ENSMUSG00195046623
 protein coding gene Chr9:32366870-32369161 (-)
AKR/J ENSMUSG00220045595
 protein coding gene Chr9:32408477-32410770 (-)
BALB/cJ ENSMUSG00180042736
 protein coding gene Chr9:32495173-32497464 (-)
C3H/HeJ ENSMUSG00175045546
 protein coding gene Chr9:32496367-32498658 (-)
C57BL/6NJ ENSMUSG00215027633
 protein coding gene Chr9:32496040-32498332 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031962
 protein coding gene Chr9:31308018-31310325 (-)
CAST/EiJ ENSTCUG00005043074
 protein coding gene Chr9:32467563-32469851 (-)
CBA/J ENSMUSG00210044149
 protein coding gene Chr9:32507457-32509759 (-)
DBA/2J ENSMUSG00185036447
 protein coding gene Chr9:32548451-32550743 (-)
FVB/NJ ENSMUSG00205032060
 protein coding gene Chr9:32857795-32860086 (-)
JF1/MsJ ENSUMUG00000039528
 protein coding gene Chr9:32731612-32733900 (-)
LP/J ENSMUSG00230029405
 protein coding gene Chr9:32971932-32974225 (-)
NOD/ShiLtJ ENSMUSG00190021129
 protein coding gene Chr9:32625937-32628229 (-)
NZO/HlLtJ ENSMUSG00225020734
 protein coding gene Chr9:32939968-32942261 (-)
PWK/PhJ ENSLUMG00010039093
 protein coding gene Chr9:32612245-32614532 (-)
SPRET/EiJ ENSMSPG00010032632
 protein coding gene Chr9:33060995-33063295 (-)
WSB/EiJ ENSIUOG00005041447
 protein coding gene Chr9:32103856-32106437 (-)



Homology
more
  • Human Ortholog
    PATE1, prostate and testis expressed 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PATE1, prostate and testis expressed 1
  • Synonyms
    PATE
  • Links
    NCBI Gene ID: 160065
    UniProt: Q8WXA2

  • Chr Location
    11q24.2; chr11:125746279-125749867 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    2 phenotype references
Male mice exhibit normal spermatozoa and fecundity.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000091215 Ensembl Gene Model | MGI Sequence Detail 2312 C57BL/6J ±  kb
transcript ENSMUST00000170021 Ensembl | MGI Sequence Detail 389 Not Applicable  
polypeptide ENSMUSP00000130484 Ensembl | MGI Sequence Detail 125 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR016054 Ly-6 antigen/uPA receptor-like
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 13
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:138601 Levitin F, et al., PATE gene clusters code for multiple, secreted TFP/Ly-6/uPAR proteins that are expressed in reproductive and neuron-rich tissues and possess neuromodulatory activity. J Biol Chem. 2008 Jun 13;283(24):16928-39
  • Latest
    J:279308 Fujihara Y, et al., Identification of multiple male reproductive tract-specific proteins that regulate sperm migration through the oviduct in mice. Proc Natl Acad Sci U S A. 2019 Sep 10;116(37):18498-18506
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory