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Ighv1-47 Gene Detail
Summary
  • Symbol
    Ighv1-47
  • Name
    immunoglobulin heavy variable 1-47
  • Synonyms
    Gm16966
Location &
Maps
more
  • Sequence Map
    Chr12:114954728-114955021 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 62.48 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    214 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4439890
 gene segment Chr12:114954728-114955200 (-)
129S1/SvImJ ENSMUSG00200031348
 gene segment Chr12:107168367-107168839 (-)
A/J ENSMUSG00195050200
 gene segment Chr12:109628388-109628458 (-)
AKR/J ENSMUSG00220041044
 gene segment Chr12:107157763-107158235 (-)
BALB/cJ ENSMUSG00180050791
 gene segment Chr12:109272297-109272769 (-)
C3H/HeJ ENSMUSG00175047811
 gene segment Chr12:110948739-110949211 (-)
C57BL/6NJ ENSMUSG00215049396
 gene segment Chr12:107822063-107822535 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0000064
 gene segment Chr12:109213222-109213696 (-)
CAST/EiJ ENSTCUG00005041033
 gene segment Chr12:108310911-108311383 (-)
CBA/J ENSMUSG00210035308
 gene segment Chr12:108224906-108225378 (-)
DBA/2J ENSMUSG00185035943
 gene segment Chr12:110588448-110588920 (-)
FVB/NJ ENSMUSG00205042949
 gene segment Chr12:107416936-107417408 (-)
JF1/MsJ ENSUMUG00000023583
 gene segment Chr12:114693257-114693729 (-)
LP/J ENSMUSG00230048677
 gene segment Chr12:117046014-117046486 (-)
NOD/ShiLtJ ENSMUSG00190041143
 gene segment Chr12:106660425-106660897 (-)
NZO/HlLtJ ENSMUSG00225044668
 gene segment Chr12:118960311-118960783 (-)
PWK/PhJ ENSLUMG00010051189
 gene segment Chr12:108439133-108439605 (-)
SPRET/EiJ ENSMSPG00010023934
 gene segment Chr12:111113288-111113358 (-)
WSB/EiJ ENSIUOG00005039513
 gene segment Chr12:107614049-107614521 (-)



Homology
more
  • Human Ortholog
    IGHV1-18, immunoglobulin heavy variable 1-18
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    IGHV1-18, immunoglobulin heavy variable 1-18
  • Synonyms
    IGHV118
  • Links
    NCBI Gene ID: 28468
    UniProt: A0A0C4DH31

  • Chr Location
    14q32.33; chr14:106184899-106185394 (-)  GRCh38
  • Human Ortholog
    IGHV1-24, immunoglobulin heavy variable 1-24
  • Synonyms
    IGHV124, VH
  • Links
    NCBI Gene ID: 28467
    UniProt: A0A0C4DH33

  • Chr Location
    14q32.33; chr14:106276546-106277043 (-)  GRCh38
  • Human Ortholog
    IGHV1-58, immunoglobulin heavy variable 1-58
  • Synonyms
    IGHV158, VH
  • Links
    NCBI Gene ID: 28464
    UniProt: A0A0C4DH39

  • Chr Location
    14q32.33; chr14:106622357-106622855 (-)  GRCh38
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    29
  • RefSeq
    1
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 629915 NCBI Gene Model | MGI Sequence Detail 294 C57BL/6J ±  kb
transcript X14623 GenBank | ENA | DDBJ | MGI Sequence Detail 466 MRL/Mp-Fas  
polypeptide A0A0A6YY41 UniProt | EBI | MGI Sequence Detail 117 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR050199 Immunoglobulin Heavy Variable
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
References
more
  • Summaries
    All 8
    Gene Ontology 1
  • Earliest
    J:35042 Kofler R, et al., Molecular analysis of the murine lupus-associated anti-self response: involvement of a large number of heavy and light chain variable region genes. Eur J Immunol. 1987 Jan;17(1):91-5
  • Latest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory