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Ighv6-3 Gene Detail
Summary
  • Symbol
    Ighv6-3
  • Name
    immunoglobulin heavy variable 6-3
  • Synonyms
    Gm16930
Location &
Maps
more
  • Sequence Map
    Chr12:114355332-114355630 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 62.36 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    122 from dbSNP Build 142
  • Strain Annotations
    20
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4439854
 gene segment Chr12:114355332-114355789 (-)
129S1/SvImJ ENSMUSG00200030119
 gene segment Chr12:106089954-106090411 (-)
A/J ENSMUSG00195047275
 gene segment Chr12:108843548-108844005 (-)
AKR/J ENSMUSG00220041385
 gene segment Chr12:106475454-106475911 (-)
BALB/cJ ENSMUSG00180051045
 gene segment Chr12:108322065-108322522 (-)
C3H/HeJ ENSMUSG00175049620
 gene segment Chr12:110465280-110465737 (-)
C57BL/6NJ ENSMUSG00215049947
 gene segment Chr12:107145136-107145593 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0000048
 gene segment Chr12:108945435-108945921 (-)
CAST/EiJ ENSTCUG00005044990
 gene segment Chr12:107644524-107644981 (-)
CAST/EiJ ENSTCUG00005043259
 gene segment Chr12:107340804-107341261 (-)
CBA/J ENSMUSG00210039560
 gene segment Chr12:107541776-107542233 (-)
DBA/2J ENSMUSG00185032207
 gene segment Chr12:109504690-109505147 (-)
FVB/NJ ENSMUSG00205044965
 gene segment Chr12:106597970-106598427 (-)
JF1/MsJ ENSUMUG00000026740
 gene segment Chr12:114141857-114142314 (-)
LP/J ENSMUSG00230047274
 gene segment Chr12:116407830-116408287 (-)
NOD/ShiLtJ ENSMUSG00190037485
 gene segment Chr12:105990956-105991413 (-)
NZO/HlLtJ ENSMUSG00225043234
 gene segment Chr12:118282943-118283400 (-)
PWK/PhJ ENSLUMG00010048933
 gene segment Chr12:107831214-107831671 (-)
SPRET/EiJ ENSMSPG00010020420
 gene segment Chr12:110542701-110543158 (-)
WSB/EiJ ENSIUOG00005042451
 gene segment Chr12:106980608-106981065 (-)



Homology
more
  • Human Ortholog
    IGHV3-72, immunoglobulin heavy variable 3-72
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    IGHV3-72, immunoglobulin heavy variable 3-72
  • Synonyms
    IGHV372, VH
  • Links
    NCBI Gene ID: 28410
    UniProt: A0A0B4J1Y9

  • Chr Location
    14q32.33; chr14:106790692-106791233 (-)  GRCh38
  • Human Ortholog
    IGHV3-73, immunoglobulin heavy variable 3-73
  • Synonyms
    IGHV373, VH
  • Links
    NCBI Gene ID: 28409
    UniProt: A0A0B4J1V6

  • Chr Location
    14q32.33; chr14:106802692-106803233 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 629845 NCBI Gene Model | MGI Sequence Detail 299 C57BL/6J ±  kb
polypeptide A0A075B5T2 UniProt | EBI | MGI Sequence Detail 118 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR050199 Immunoglobulin Heavy Variable
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
  • GlyGen
    A0A075B5T2 1 site, 1 O-linked glycan (1 site)
References
more
  • Summaries
    All 7
    Gene Ontology 1
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory