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Ighv5-15 Gene Detail
Summary
  • Symbol
    Ighv5-15
  • Name
    immunoglobulin heavy variable 5-15
  • Synonyms
    Gm16888
Location &
Maps
more
  • Sequence Map
    Chr12:113790268-113790561 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 62.20 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    133 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4439812
 gene segment Chr12:113790266-113790749 (-)
129S1/SvImJ ENSMUSG00200030947
 gene segment Chr12:105527166-105527644 (-)
A/J ENSMUSG00195046499
 gene segment Chr12:108259767-108260247 (-)
AKR/J ENSMUSG00220041277
 gene segment Chr12:106005762-106006244 (-)
BALB/cJ ENSMUSG00180051656
 gene segment Chr12:107715262-107715740 (-)
C3H/HeJ ENSMUSG00175049346
 gene segment Chr12:109977880-109978362 (-)
C57BL/6NJ ENSMUSG00215048382
 gene segment Chr12:106579544-106580027 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0000031
 gene segment Chr12:108361837-108362319 (-)
CAST/EiJ no annotation
CBA/J ENSMUSG00210031534
 gene segment Chr12:107073561-107074043 (-)
DBA/2J ENSMUSG00185031301
 gene segment Chr12:108690998-108691477 (-)
FVB/NJ ENSMUSG00205044793
 gene segment Chr12:106033407-106033890 (-)
JF1/MsJ ENSUMUG00000033084
 gene segment Chr12:113585699-113586182 (-)
LP/J ENSMUSG00230047302
 gene segment Chr12:115842506-115842989 (-)
NOD/ShiLtJ ENSMUSG00190027676
 gene segment Chr12:105425612-105426095 (-)
NZO/HlLtJ ENSMUSG00225044761
 gene segment Chr12:117814804-117815286 (-)
PWK/PhJ ENSLUMG00010046482
 gene segment Chr12:107240133-107240615 (-)
SPRET/EiJ ENSMSPG00010025649
 gene segment Chr12:109223061-109223541 (-)
WSB/EiJ ENSIUOG00005041397
 gene segment Chr12:106221575-106222054 (-)



Homology
more
  • Human Ortholog
    IGHV3-11, immunoglobulin heavy variable 3-11
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    IGHV3-11, immunoglobulin heavy variable 3-11
  • Synonyms
    IGHV311, VH
  • Links
    NCBI Gene ID: 28450
    UniProt: P01762

  • Chr Location
    14q32.33; chr14:106116635-106117204 (-)  GRCh38
  • Human Ortholog
    IGHV3OR16-17, immunoglobulin heavy variable 3/OR16-17 (non-functional)
  • Links
    NCBI Gene ID: 390714

  • Chr Location
    16p11.2; chr16:33844758-33845308 (-)  GRCh38
  • Human Ortholog
    IGHV3OR16-8, immunoglobulin heavy variable 3/OR16-8 (non-functional)
  • Synonyms
    IGHV3/OR16-8, IGHV3OR168
  • Links
    NCBI Gene ID: 388255

  • Chr Location
    16p11.2; chr16:33009124-33009646 (+)  GRCh38
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 780792 NCBI Gene Model | MGI Sequence Detail 294 C57BL/6J ±  kb
polypeptide A0A0A6YWC7 UniProt | EBI | MGI Sequence Detail 117 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR050199 Immunoglobulin Heavy Variable
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
References
more
  • Summaries
    All 8
    Gene Ontology 2
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory