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Ighv3-1 Gene Detail
Summary
  • Symbol
    Ighv3-1
  • Name
    immunoglobulin heavy variable 3-1
  • Synonyms
    Gm16610
Location &
Maps
more
  • Sequence Map
    Chr12:113928010-113928303 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 62.24 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    65 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4439534
 gene segment Chr12:113928008-113928438 (-)
129S1/SvImJ ENSMUSG00200031190
 gene segment Chr12:105690126-105690557 (-)
A/J ENSMUSG00195048722
 gene segment Chr12:108398305-108398736 (-)
AKR/J ENSMUSG00220037973
 gene segment Chr12:106171119-106171549 (-)
BALB/cJ ENSMUSG00180053118
 gene segment Chr12:107856029-107856460 (-)
C3H/HeJ ENSMUSG00175046808
 gene segment Chr12:110160914-110161344 (-)
C57BL/6NJ ENSMUSG00215048454
 gene segment Chr12:106717522-106717952 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005044296
 gene segment Chr12:106363697-106364127 (-)
CBA/J ENSMUSG00210042440
 gene segment Chr12:107237425-107237855 (-)
DBA/2J ENSMUSG00185028178
 protein coding gene Chr12:108822354-108822825 (-)
FVB/NJ ENSMUSG00205021382
 protein coding gene Chr12:106226551-106227022 (-)
JF1/MsJ ENSUMUG00000025888
 gene segment Chr12:113723608-113723668 (-)
LP/J ENSMUSG00230047032
 gene segment Chr12:115980467-115980897 (-)
NOD/ShiLtJ ENSMUSG00190039425
 gene segment Chr12:105563596-105564026 (-)
NZO/HlLtJ ENSMUSG00225044745
 gene segment Chr12:117978623-117979053 (-)
PWK/PhJ no annotation
SPRET/EiJ ENSMSPG00010024080
 gene segment Chr12:109349872-109350303 (-)
WSB/EiJ ENSIUOG00005035212
 protein coding gene Chr12:106551493-106551948 (-)



Homology
more
  • Human Ortholog
    IGHV4-28, immunoglobulin heavy variable 4-28
  • Vertebrate Orthologs
    13
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    IGHV4-28, immunoglobulin heavy variable 4-28
  • Synonyms
    IGHV428, VH
  • Links
    NCBI Gene ID: 28400
    UniProt: A0A0C4DH34

  • Chr Location
    14q32.33; chr14:106324254-106324760 (-)  GRCh38
  • Human Ortholog
    IGHV4-30-2, immunoglobulin heavy variable 4-30-2
  • Synonyms
    IGHV4-3, IGHV4302
  • Links
    NCBI Gene ID: 28398

  • Chr Location
    14q32.33; chr14:106349283-106349720 (-)  GRCh38
  • Human Ortholog
    IGHV4-30-4, immunoglobulin heavy variable 4-30-4
  • Synonyms
    IGHV4-3, IGHV4304
  • Links
    NCBI Gene ID: 28397
    UniProt: P0DP06

  • Chr Location
    14q32.33
  • Human Ortholog
    IGHV4-31, immunoglobulin heavy variable 4-31
  • Synonyms
    IGHV431
  • Links
    NCBI Gene ID: 28396
    UniProt: P0DP07

  • Chr Location
    14q32.33; chr14:106349283-106349792 (-)  GRCh38
  • Human Ortholog
    IGHV4-34, immunoglobulin heavy variable 4-34
  • Synonyms
    IGHV434, VH
  • Links
    NCBI Gene ID: 28395
    UniProt: P06331

  • Chr Location
    14q32.33; chr14:106373661-106374145 (-)  GRCh38
  • Human Ortholog
    IGHV4-38-2, immunoglobulin heavy variable 4-38-2
  • Synonyms
    IGHV4-B, IGHV4B
  • Links
    NCBI Gene ID: 28389
    UniProt: P0DP08

  • Chr Location
    14q32.33
  • Human Ortholog
    IGHV4-39, immunoglobulin heavy variable 4-39
  • Synonyms
    IGHV439, VH
  • Links
    NCBI Gene ID: 28394
    UniProt: P01824

  • Chr Location
    14q32.33; chr14:106421709-106422218 (-)  GRCh38
  • Human Ortholog
    IGHV4-4, immunoglobulin heavy variable 4-4
  • Synonyms
    IGHV44, VH
  • Links
    NCBI Gene ID: 28401
    UniProt: A0A075B6R2

  • Chr Location
    14q32.33; chr14:106011922-106012420 (-)  GRCh38
  • Human Ortholog
    IGHV4-59, immunoglobulin heavy variable 4-59
  • Synonyms
    IGHV459, VH
  • Links
    NCBI Gene ID: 28392
    UniProt: P01825

  • Chr Location
    14q32.33; chr14:106627249-106627825 (-)  GRCh38
  • Human Ortholog
    IGHV4-61, immunoglobulin heavy variable 4-61
  • Synonyms
    IGHV461, VH
  • Links
    NCBI Gene ID: 28391
    UniProt: A0A0C4DH41

  • Chr Location
    14q32.33; chr14:106639119-106639657 (-)  GRCh38
  • Human Ortholog
    IGHV4OR15-8, immunoglobulin heavy variable 4/OR15-8 (non-functional)
  • Synonyms
    IGHV4OR158, VSIG6
  • Links
    NCBI Gene ID: 28317

  • Chr Location
    15q11.2; chr15:22184967-22185402 (-)  GRCh38
  • Human Ortholog
    IGHV6-1, immunoglobulin heavy variable 6-1
  • Synonyms
    IGHV61, VH
  • Links
    NCBI Gene ID: 28385
    UniProt: A0A0B4J1U7

  • Chr Location
    14q32.33; chr14:105939754-105940253 (-)  GRCh38
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 780803 NCBI Gene Model | MGI Sequence Detail 294 C57BL/6J ±  kb
polypeptide A0A075B5S6 UniProt | EBI | MGI Sequence Detail 116 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR050199 Immunoglobulin Heavy Variable
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
References
more
  • Summaries
    All 7
    Gene Ontology 1
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory