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Krtap5-20 Gene Detail
Summary
  • Symbol
    Krtap5-20
  • Name
    keratin associated protein 5-20
  • Synonyms
    Gm4559
Location &
Maps
more
  • Sequence Map
    Chr7:141827501-141828100 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 87.84 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    246 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3782743
 protein coding gene Chr7:141827501-141828100 (-)
129S1/SvImJ ENSMUSG00200040950
 protein coding gene Chr7:128393381-128393980 (-)
A/J ENSMUSG00195033001
 protein coding gene Chr7:132875419-132876018 (-)
AKR/J ENSMUSG00220024895
 protein coding gene Chr7:126357637-126358236 (-)
BALB/cJ ENSMUSG00180037412
 protein coding gene Chr7:129561283-129561882 (-)
C3H/HeJ ENSMUSG00175041587
 protein coding gene Chr7:130296335-130296934 (-)
C57BL/6NJ ENSMUSG00215043719
 protein coding gene Chr7:129562702-129563301 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005045900
 protein coding gene Chr7:132861933-132862631 (-)
CBA/J ENSMUSG00210026392
 protein coding gene Chr7:130054274-130054873 (-)
DBA/2J ENSMUSG00185014827
 protein coding gene Chr7:134332856-134333455 (-)
FVB/NJ ENSMUSG00205030489
 protein coding gene Chr7:129974986-129975585 (-)
JF1/MsJ no annotation
LP/J ENSMUSG00230040644
 protein coding gene Chr7:140496220-140496819 (-)
NOD/ShiLtJ ENSMUSG00190023800
 protein coding gene Chr7:130161756-130162355 (-)
NZO/HlLtJ ENSMUSG00225050095
 protein coding gene Chr7:138705139-138705738 (-)
PWK/PhJ ENSLUMG00010045494
 protein coding gene Chr7:128533046-128533801 (-)
SPRET/EiJ ENSMSPG00010038790
 protein coding gene Chr7:129999005-129999715 (-)
WSB/EiJ ENSIUOG00005028308
 protein coding gene Chr7:130921159-130921881 (-)



Homology
more
  • Human Ortholog
    KRTAP5-11, keratin associated protein 5-11
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KRTAP5-11, keratin associated protein 5-11
  • Synonyms
    KRTAP5.11, KRTAP5-6
  • Links
    NCBI Gene ID: 440051
    UniProt: Q6L8G4

  • Chr Location
    11q13.4; chr11:71581855-71603353 (-)  GRCh38
  • Human Ortholog
    KRTAP5-3, keratin associated protein 5-3
  • Synonyms
    KRTAP5.3, KRTAP5-9
  • Links
    NCBI Gene ID: 387266
    UniProt: Q6L8H2

  • Chr Location
    11p15.5; chr11:1607565-1608463 (-)  GRCh38
  • Human Ortholog
    KRTAP5-9, keratin associated protein 5-9
  • Synonyms
    KRN1, KRTAP5-1, KRTAP5.9
  • Links
    NCBI Gene ID: 3846
    UniProt: P26371

  • Chr Location
    11q13.4; chr11:71548420-71549608 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 100043627 NCBI Gene Model | MGI Sequence Detail 600 C57BL/6J ±  kb
transcript NM_001199309 RefSeq | MGI Sequence Detail 600 C57BL/6  
polypeptide NP_001186238 RefSeq | MGI Sequence Detail 199 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
Other
Accession IDs
less
MGI:7580769
References
more
  • Summaries
    All 13
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:65007 Cattanach BM, et al., Two imprinted gene mutations: three phenotypes. Hum Mol Genet. 2000 Sep 22;9(15):2263-73
  • Latest
    J:187438 Peters J, et al., Identification and characterisation of imprinted genes in the mouse. Brief Funct Genomic Proteomic. 2004 Feb;2(4):320-33
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory