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Bpifb9a Gene Detail
Summary
  • Symbol
    Bpifb9a
  • Name
    BPI fold containing family B, member 9A
  • Synonyms
    4833413D08Rik, vomeromodulin
Location &
Maps
more
  • Sequence Map
    Chr2:154099774-154113165 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 76.34 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    355 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3767993
 protein coding gene Chr2:154099774-154113165 (+)
129S1/SvImJ ENSMUSG00200026325
 protein coding gene Chr2:151018198-151031632 (+)
A/J ENSMUSG00195018476
 protein coding gene Chr2:151325476-151338888 (+)
AKR/J ENSMUSG00220045380
 protein coding gene Chr2:150621533-150634945 (+)
BALB/cJ ENSMUSG00180040398
 protein coding gene Chr2:150790399-150803790 (+)
C3H/HeJ ENSMUSG00175042628
 protein coding gene Chr2:151534607-151547998 (+)
C57BL/6NJ ENSMUSG00215031548
 protein coding gene Chr2:150946866-150960257 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024506
 protein coding gene Chr2:146193066-146242376 (+)
CAST/EiJ no annotation
CBA/J ENSMUSG00210043120
 protein coding gene Chr2:151471093-151484484 (+)
DBA/2J ENSMUSG00185045159
 protein coding gene Chr2:151158688-151172100 (+)
FVB/NJ ENSMUSG00205034603
 protein coding gene Chr2:150236438-150249829 (+)
JF1/MsJ no annotation
LP/J ENSMUSG00230031406
 protein coding gene Chr2:152766858-152780249 (+)
NOD/ShiLtJ ENSMUSG00190036297
 protein coding gene Chr2:150909451-150922862 (+)
NZO/HlLtJ ENSMUSG00225004487
 protein coding gene Chr2:160797455-160810846 (+)
PWK/PhJ ENSLUMG00010039609
 protein coding gene Chr2:150808542-150821965 (+)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    BPIFB9P, BPI fold containing family B member 9, pseudogene
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    BPIFB9P, BPI fold containing family B member 9, pseudogene
  • Synonyms
    C20orf115, dJ1187J4.2, dJ1187J4.3
  • Links
    NCBI Gene ID: 402016

  • Chr Location
    20q11.21; chr20:33347120-33355044 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    68
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 71425 NCBI Gene Model | MGI Sequence Detail 13392 C57BL/6J ±  kb
transcript NM_175167 RefSeq | MGI Sequence Detail 2065 C57BL/6  
polypeptide Q80XI7 UniProt | EBI | MGI Sequence Detail 591 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017942 Lipid-binding serum glycoprotein, N-terminal
    IPR034433 Vomeromodulin
    IPR063863 Vomeromodulin, C-terminal domain
  • GlyGen
    Q80XI7 6 sites, 5 N-linked glycans (5 sites)
Molecular
Reagents
less
  • All nucleic 68
    cDNA 68

    Microarray probesets 1
References
more
  • Summaries
    All 19
    Gene Ontology 4
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:174122 Bingle CD, et al., Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a subfamily of the BPI fold-containing superfamily. Biochem Soc Trans. 2011 Aug 1;39(4):977-83
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory