About   Help   FAQ
H2al1h Gene Detail
Summary
  • Symbol
    H2al1h
  • Name
    H2A histone family member L1H
  • Synonyms
    Gm14478
Location &
Maps
more
  • Sequence Map
    ChrX:11187731-11188048 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 6.06 cM
Strain
Comparison
more
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3711282
 protein coding gene ChrX:11187692-11188133 (+)
129S1/SvImJ no annotation
A/J ENSMUSG00195039364
 protein coding gene ChrX:5896796-5897289 (+)
A/J ENSMUSG00195039399
 protein coding gene ChrX:5899926-5900456 (+)
AKR/J no annotation
BALB/cJ ENSMUSG00180029500
 protein coding gene ChrX:5902635-5903128 (+)
C3H/HeJ ENSMUSG00175030779
 protein coding gene ChrX:5918378-5918871 (+)
C3H/HeJ ENSMUSG00175030819
 protein coding gene ChrX:5921509-5922039 (+)
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J ENSMUSG00210033461
 protein coding gene ChrX:5964441-5964971 (+)
CBA/J ENSMUSG00210032966
 protein coding gene ChrX:5961310-5961803 (+)
DBA/2J ENSMUSG00185035638
 protein coding gene ChrX:12553674-12554174 (+)
DBA/2J ENSMUSG00185035234
 protein coding gene ChrX:12547340-12547840 (+)
DBA/2J ENSMUSG00185036212
 protein coding gene ChrX:12566351-12566844 (+)
FVB/NJ no annotation
JF1/MsJ no annotation
LP/J ENSMUSG00230027665
 protein coding gene ChrX:17146384-17146914 (+)
NOD/ShiLtJ ENSMUSG00190037786
 protein coding gene ChrX:5929564-5930057 (+)
NOD/ShiLtJ ENSMUSG00190033260
 protein coding gene ChrX:5913720-5914220 (+)
NOD/ShiLtJ ENSMUSG00190033701
 protein coding gene ChrX:5920063-5920557 (+)
NZO/HlLtJ ENSMUSG00225032903
 protein coding gene ChrX:22349175-22349668 (+)
NZO/HlLtJ ENSMUSG00225033449
 protein coding gene ChrX:22342803-22343333 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    H2AL3, H2A.L variant histone 3
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    H2AL3, H2A.L variant histone 3
  • Synonyms
    H2AL1RP, H2A.L.3
  • Links
    NCBI Gene ID: 115482686
    UniProt: A0A3B3IU63

  • Chr Location
    chrX:37994272-37994904 (+)  GRCh38
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000099443 Ensembl Gene Model | MGI Sequence Detail 318 C57BL/6J ±  kb
transcript ENSMUST00000177926 Ensembl | MGI Sequence Detail 318 Not Applicable  
polypeptide ENSMUSP00000136794 Ensembl | MGI Sequence Detail 105 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 10
  • Earliest
    J:119495 Govin J, et al., Pericentric heterochromatin reprogramming by new histone variants during mouse spermiogenesis. J Cell Biol. 2007 Jan 29;176(3):283-94
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory