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Nhlrc4 Gene Detail
Summary
  • Symbol
    Nhlrc4
  • Name
    NHL repeat containing 4
  • Synonyms
    F430201B04Rik
Location &
Maps
more
  • Sequence Map
    Chr17:26161207-26163905 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 13.03 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    105 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3687200
 protein coding gene Chr17:26161207-26163935 (-)
129S1/SvImJ ENSMUSG00200047273
 protein coding gene Chr17:21606247-21608944 (-)
A/J ENSMUSG00195054244
 protein coding gene Chr17:22623389-22626092 (-)
AKR/J ENSMUSG00220052211
 protein coding gene Chr17:21670208-21672905 (-)
BALB/cJ ENSMUSG00180049626
 protein coding gene Chr17:21904263-21906964 (-)
C3H/HeJ ENSMUSG00175053566
 protein coding gene Chr17:21662451-21665148 (-)
C57BL/6NJ ENSMUSG00215053196
 protein coding gene Chr17:21670813-21673515 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021265
 protein coding gene Chr17:21779874-21782517 (-)
CAST/EiJ ENSTCUG00005047840
 protein coding gene Chr17:22252187-22254882 (-)
CBA/J ENSMUSG00210049364
 protein coding gene Chr17:21501287-21503986 (-)
DBA/2J ENSMUSG00185052512
 protein coding gene Chr17:23711639-23714338 (-)
FVB/NJ ENSMUSG00205025469
 protein coding gene Chr17:21967371-21970072 (-)
JF1/MsJ ENSUMUG00000054606
 protein coding gene Chr17:23166928-23169641 (-)
LP/J ENSMUSG00230054593
 protein coding gene Chr17:25110780-25113477 (-)
NOD/ShiLtJ ENSMUSG00190041347
 protein coding gene Chr17:21600357-21603058 (-)
NZO/HlLtJ ENSMUSG00225053979
 protein coding gene Chr17:27030708-27033407 (-)
PWK/PhJ ENSLUMG00010045723
 protein coding gene Chr17:21086067-21088764 (-)
SPRET/EiJ ENSMSPG00010047671
 protein coding gene Chr17:22404635-22406097 (-)
WSB/EiJ ENSIUOG00005050817
 protein coding gene Chr17:22344044-22346738 (-)



Homology
more
  • Human Ortholog
    NHLRC4, NHL repeat containing 4
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    NHLRC4, NHL repeat containing 4
  • Links
    NCBI Gene ID: 283948
    UniProt: P0CG21

  • Chr Location
    16p13.3; chr16:567005-569495 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Endonuclease-mediated
    1
  • Radiation induced
    2
  • Targeted
    1
  • Genomic Mutations
    2 involving Nhlrc4
  • Find Mice (IMSR)
    9 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

Biological Process

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 621239 NCBI Gene Model | MGI Sequence Detail 2699 C57BL/6J ±  kb
transcript NM_001039038 RefSeq | MGI Sequence Detail 2152 C57BL/6  
polypeptide Q3UP44 UniProt | EBI | MGI Sequence Detail 136 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 18
    Phenotypes 6
  • Earliest
    J:86784 Bergstrom DE, et al., Overlapping deletions spanning the proximal two-thirds of the mouse t complex. Mamm Genome. 2003 Dec;14(12):817-29
  • Latest
    J:194116 Flachs P, et al., Interallelic and intergenic incompatibilities of the Prdm9 (Hst1) gene in mouse hybrid sterility. PLoS Genet. 2012;8(11):e1003044
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory