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Nkx2-2os Gene Detail
Summary
  • Symbol
    Nkx2-2os
  • Name
    NK2 homeobox 2, opposite strand
  • Synonyms
    Gm14112, Nkx2-2as
Location &
Maps
more
  • Sequence Map
    Chr2:147026003-147173601 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 72.63 cM
Strain
Comparison
more
  • SNPs within 2kb
    4348 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3652259
 antisense lncRNA gene Chr2:147025931-147192363 (+)
129S1/SvImJ ENSMUSG00200030198
 lncRNA gene Chr2:144138663-144286239 (+)
A/J ENSMUSG00195021928
 lncRNA gene Chr2:144269136-144421032 (+)
AKR/J ENSMUSG00220046280
 lncRNA gene Chr2:143847591-143995185 (+)
BALB/cJ ENSMUSG00180044074
 lncRNA gene Chr2:143930764-144082639 (+)
C3H/HeJ ENSMUSG00175047503
 lncRNA gene Chr2:144477710-144629520 (+)
C57BL/6NJ ENSMUSG00215033825
 lncRNA gene Chr2:143988425-144136047 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003276
 antisense lncRNA gene Chr2:139354043-139495816 (+)
CAST/EiJ ENSTCUG00005044120
 lncRNA gene Chr2:143127114-143273665 (+)
CBA/J ENSMUSG00210044720
 lncRNA gene Chr2:144396915-144548774 (+)
DBA/2J ENSMUSG00185048453
 lncRNA gene Chr2:144017266-144164934 (+)
FVB/NJ ENSMUSG00205041794
 lncRNA gene Chr2:143201798-143353034 (+)
JF1/MsJ ENSUMUG00000047012
 lncRNA gene Chr2:143807249-143955054 (+)
LP/J ENSMUSG00230036067
 lncRNA gene Chr2:145721033-145868562 (+)
NOD/ShiLtJ ENSMUSG00190044716
 lncRNA gene Chr2:144068148-144218565 (+)
NZO/HlLtJ no annotation
PWK/PhJ ENSLUMG00010045233
 lncRNA gene Chr2:143833128-143980500 (+)
SPRET/EiJ ENSMSPG00010028758
 lncRNA gene Chr2:146317457-146465282 (+)
WSB/EiJ ENSIUOG00005047605
 lncRNA gene Chr2:143836758-143988017 (+)



Homology
more
  • Human Ortholog
    LINC01727, long independently transcribed non-coding RNA 1727
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LINC01727, long independently transcribed non-coding RNA 1727
  • Synonyms
    IRENA
  • Links
    NCBI Gene ID: 101929625

  • Chr Location
    chr20:21557367-21688006 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Nkx2-2os
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    38
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100313531 NCBI Gene Model | MGI Sequence Detail 147599 C57BL/6J ±  kb
transcript NR_030769 RefSeq | MGI Sequence Detail 4345 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 11
    Phenotypes 3
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:137762 Tochitani S, et al., Nkx2.2 antisense RNA overexpression enhanced oligodendrocytic differentiation. Biochem Biophys Res Commun. 2008 Aug 8;372(4):691-6
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory