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Msantd5 Gene Detail
Summary
  • Symbol
    Msantd5
  • Name
    Myb/SANT DNA binding domain containing 5
  • Synonyms
    Gm12569
  • Feature Type
    protein coding gene
  • IDs
    MGI:3650740
    NCBI Gene: 622699
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:51111300-51125880 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 31.02 cM
Strain
Comparison
more
  • SNPs within 2kb
    392 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650740
 protein coding gene Chr11:51111300-51130585 (+)
129S1/SvImJ ENSMUSG00200039588
 protein coding gene Chr11:48098259-48112839 (+)
A/J ENSMUSG00195032677
 protein coding gene Chr11:48041261-48055843 (+)
AKR/J ENSMUSG00220030706
 protein coding gene Chr11:48230122-48244703 (+)
BALB/cJ ENSMUSG00180030304
 protein coding gene Chr11:48102708-48117290 (+)
C3H/HeJ ENSMUSG00175035086
 protein coding gene Chr11:48072807-48087387 (+)
C57BL/6NJ ENSMUSG00215034226
 protein coding gene Chr11:47974195-47988775 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002599
 antisense lncRNA gene Chr11:46139523-46141118 (+)
CAST/EiJ ENSTCUG00005041526
 protein coding gene Chr11:47670045-47684616 (+)
CBA/J ENSMUSG00210028572
 protein coding gene Chr11:47928800-47943382 (+)
DBA/2J ENSMUSG00185024990
 protein coding gene Chr11:48138032-48152722 (+)
FVB/NJ ENSMUSG00205018278
 protein coding gene Chr11:47971140-47985717 (+)
JF1/MsJ ENSUMUG00000023243
 protein coding gene Chr11:48493592-48508148 (+)
LP/J ENSMUSG00230030125
 protein coding gene Chr11:49322041-49336621 (+)
NOD/ShiLtJ ENSMUSG00190027198
 protein coding gene Chr11:48201954-48216542 (+)
NZO/HlLtJ ENSMUSG00225030635
 protein coding gene Chr11:51350819-51365379 (+)
PWK/PhJ ENSLUMG00010029698
 protein coding gene Chr11:47961244-47975783 (+)
SPRET/EiJ ENSMSPG00010017065
 protein coding gene Chr11:48633566-48636198 (+)
WSB/EiJ ENSIUOG00005039000
 protein coding gene Chr11:47986260-48000854 (+)



Homology
more
  • Human Ortholog
    MSANTD5, Myb/SANT DNA binding domain containing 5
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MSANTD5, Myb/SANT DNA binding domain containing 5
  • Links
    NCBI Gene ID: 102724657
    UniProt: A0A3B3IT52

  • Chr Location
    chr5:178691534-178707472 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    37
  • RefSeq
    10
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000061469 Ensembl Gene Model | MGI Sequence Detail 14581 C57BL/6J ±  kb
transcript ENSMUST00000126189 Ensembl | MGI Sequence Detail 1462 Not Applicable  
polypeptide ENSMUSP00000155969 Ensembl | MGI Sequence Detail 225 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less

  • Microarray probesets 1
Other
Accession IDs
less
MGI:6456843
References
more
  • Summaries
    All 12
    Phenotypes 3
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory