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Lrtm3 Gene Detail
Summary
  • Symbol
    Lrtm3
  • Name
    leucine rich repeat transmembrane protein 3
  • Synonyms
    Ccdc168, Gm8251
Location &
Maps
more
  • Sequence Map
    Chr1:44095032-44118906 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 23.54 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    550 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647616
 protein coding gene Chr1:44095031-44118906 (-)
129S1/SvImJ ENSMUSG00200001704
 protein coding gene Chr1:41724065-41747912 (-)
A/J ENSMUSG00195001847
 protein coding gene Chr1:41431528-41455364 (-)
AKR/J ENSMUSG00220003277
 protein coding gene Chr1:41428996-41452854 (-)
BALB/cJ ENSMUSG00180002963
 protein coding gene Chr1:41440143-41464019 (-)
C3H/HeJ ENSMUSG00175000077
 protein coding gene Chr1:41439182-41463016 (-)
C57BL/6NJ ENSMUSG00215002951
 protein coding gene Chr1:41415244-41439118 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014098
 protein coding gene Chr1:38599725-38605733 (-)
CAST/EiJ ENSTCUG00005000784
 protein coding gene Chr1:41513493-41537323 (-)
CBA/J ENSMUSG00210028061
 protein coding gene Chr1:41190745-41214597 (-)
DBA/2J ENSMUSG00185029772
 protein coding gene Chr1:42291920-42315772 (-)
FVB/NJ ENSMUSG00205003258
 protein coding gene Chr1:41376865-41400723 (-)
JF1/MsJ ENSUMUG00000001554
 protein coding gene Chr1:41506692-41530506 (-)
LP/J ENSMUSG00230000861
 protein coding gene Chr1:42325704-42349578 (-)
NOD/ShiLtJ ENSMUSG00190002160
 protein coding gene Chr1:41402572-41426426 (-)
NZO/HlLtJ ENSMUSG00225000478
 protein coding gene Chr1:45560829-45584703 (-)
PWK/PhJ ENSLUMG00010002434
 protein coding gene Chr1:41013792-41037602 (-)
SPRET/EiJ ENSMSPG00010012713
 protein coding gene Chr1:42613323-42637170 (-)
WSB/EiJ ENSIUOG00005003552
 protein coding gene Chr1:41376474-41400333 (-)



Homology
more
  • Human Ortholog
    LRTM3, leucine rich repeat transmembrane protein 3
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LRTM3, leucine rich repeat transmembrane protein 3
  • Synonyms
    C13orf40, CCDC168
  • Links
    NCBI Gene ID: 643677
    UniProt: Q8NDH2

  • Chr Location
    13q33.1; chr13:102729367-102759072 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    29
  • RefSeq
    2
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000091844 Ensembl Gene Model | MGI Sequence Detail 23875 C57BL/6J ±  kb
transcript ENSMUST00000238662 Ensembl | MGI Sequence Detail 20036 Not Applicable  
polypeptide ENSMUSP00000158837 Ensembl | MGI Sequence Detail 6590 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR053366 Coiled-coil domain-containing protein 168
    IPR031624 Coiled-coil domain-containing protein 168, N-terminal
  • GlyGen
    A0A571BEV2 8 sites, 6 N-linked glycans (6 sites)
Other
Accession IDs
less
MGI:7444316, MGI:8328267
References
more
  • Summaries
    All 9
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory