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Slc10a4-ps Pseudogene Detail
Summary
  • Symbol
    Slc10a4-ps
  • Name
    solute carrier family 10 (sodium/bile acid cotransporter family), pseudogene
  • Synonyms
    Gm5868, Slc10a4l
Location &
Maps
more
  • Sequence Map
    Chr5:72738981-72744893 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 38.44 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    244 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645333
 pseudogene Chr5:72738981-72744894 (-)
129S1/SvImJ ENSMUSG00200035373
 protein coding gene Chr5:68396293-68402205 (-)
A/J ENSMUSG00195031220
 protein coding gene Chr5:67720521-67726432 (-)
AKR/J ENSMUSG00220003280
 protein coding gene Chr5:67832174-67838083 (-)
BALB/cJ ENSMUSG00180021300
 protein coding gene Chr5:67477513-67483424 (-)
C3H/HeJ ENSMUSG00175026316
 protein coding gene Chr5:69527103-69532902 (-)
C57BL/6NJ ENSMUSG00215004684
 protein coding gene Chr5:68311658-68317569 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0027285
 protein coding gene Chr5:65523914-65528804 (-)
CAST/EiJ no annotation
CBA/J ENSMUSG00210022642
 protein coding gene Chr5:68465306-68471105 (-)
DBA/2J ENSMUSG00185005477
 protein coding gene Chr5:70294930-70300729 (-)
FVB/NJ ENSMUSG00205025485
 protein coding gene Chr5:67272824-67278870 (-)
JF1/MsJ no annotation
LP/J ENSMUSG00230015927
 protein coding gene Chr5:74970681-74976592 (-)
NOD/ShiLtJ ENSMUSG00190004006
 protein coding gene Chr5:67393823-67399622 (-)
NZO/HlLtJ ENSMUSG00225009433
 protein coding gene Chr5:80040866-80046777 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ ENSIUOG00005016727
 protein coding gene Chr5:70257040-70262837 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    18 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Spontaneous
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving Slc10a4-ps
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    2 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

Biological Process

Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 545758 NCBI Gene Model | MGI Sequence Detail 5913 C57BL/6J ±  kb
transcript NR_163693 RefSeq | MGI Sequence Detail 1381 C57BL/6  
polypeptide Q8BJG1 UniProt | EBI | MGI Sequence Detail 145 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    2 Sequences
  • InterPro Domains
    IPR004710 Bile acid:sodium symporter
    IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3
    IPR038770 Sodium/solute symporter superfamily
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
Other
Accession IDs
less
MGI:6330779, MGI:6436712
References
more
  • Summaries
    All 28
    Gene Ontology 2
    Phenotypes 18
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory