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Ccdc196 Gene Detail
Summary
  • Symbol
    Ccdc196
  • Name
    coiled-coil domain containing 196
  • Synonyms
    Gm6657
  • Feature Type
    protein coding gene
  • IDs
    MGI:3645257
    NCBI Gene: 626215
  • Alliance
    genome feature page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:78241016-78255803 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 35.51 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    467 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645257
 protein coding gene Chr12:78241016-78260938 (+)
129S1/SvImJ ENSMUSG00200028727
 protein coding gene Chr12:70202157-70216939 (+)
A/J ENSMUSG00195028521
 protein coding gene Chr12:72903680-72918467 (+)
AKR/J ENSMUSG00220014210
 protein coding gene Chr12:70685207-70699996 (+)
BALB/cJ ENSMUSG00180018067
 protein coding gene Chr12:71874573-71889363 (+)
C3H/HeJ ENSMUSG00175034659
 protein coding gene Chr12:75036138-75050925 (+)
C57BL/6NJ ENSMUSG00215041992
 protein coding gene Chr12:71240664-71255451 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004874
 lincRNA gene Chr12:72695385-72706796 (+)
CAST/EiJ ENSTCUG00005033507
 protein coding gene Chr12:71174877-71189662 (+)
CBA/J ENSMUSG00210045283
 protein coding gene Chr12:71450526-71465313 (+)
DBA/2J ENSMUSG00185041550
 protein coding gene Chr12:73311094-73325881 (+)
FVB/NJ ENSMUSG00205032553
 protein coding gene Chr12:71055126-71069914 (+)
JF1/MsJ ENSUMUG00000020013
 protein coding gene Chr12:77314091-77328109 (+)
LP/J ENSMUSG00230020093
 protein coding gene Chr12:80320382-80335163 (+)
NOD/ShiLtJ ENSMUSG00190010876
 protein coding gene Chr12:70508930-70523722 (+)
NZO/HlLtJ ENSMUSG00225036908
 protein coding gene Chr12:82382286-82397075 (+)
PWK/PhJ ENSLUMG00010027252
 protein coding gene Chr12:71327434-71342235 (+)
SPRET/EiJ ENSMSPG00010015877
 protein coding gene Chr12:73150017-73163875 (+)
WSB/EiJ ENSIUOG00005011933
 protein coding gene Chr12:71138134-71152933 (+)



Homology
more
  • Human Ortholog
    CCDC196, coiled-coil domain containing 196
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCDC196, coiled-coil domain containing 196
  • Synonyms
    C14orf53, LINC00238, NCRNA00238
  • Links
    NCBI Gene ID: 440184
    UniProt: A0A1B0GTZ2

  • Chr Location
    14q23.3; chr14:66411704-66498677 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Genomic Mutations
    1 involving Ccdc196
  • Find Mice (IMSR)
    8 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    41
  • RefSeq
    10
  • UniProt
    3
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000099418 Ensembl Gene Model | MGI Sequence Detail 14788 C57BL/6J ±  kb
transcript ENSMUST00000211288 Ensembl | MGI Sequence Detail 1091 Not Applicable  
polypeptide ENSMUSP00000147546 Ensembl | MGI Sequence Detail 277 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR038857 Coiled-coil domain-containing protein 196
Other
Accession IDs
less
MGI:7516370
References
more
  • Summaries
    All 10
    Phenotypes 3
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory