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Gm5901 Gene Detail
Summary
  • Symbol
    Gm5901
  • Name
    predicted gene 5901
Location &
Maps
more
  • Sequence Map
    Chr7:105024245-105027584 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 55.84 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    116 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3643909
 protein coding gene Chr7:105024245-105027584 (+)
129S1/SvImJ ENSMUSG00200033803
 protein coding gene Chr7:91783334-91786782 (+)
A/J ENSMUSG00195053007
 protein coding gene Chr7:96285893-96289341 (+)
AKR/J ENSMUSG00220044304
 protein coding gene Chr7:89663159-89666607 (+)
BALB/cJ ENSMUSG00180035253
 protein coding gene Chr7:92965427-92968875 (+)
C3H/HeJ ENSMUSG00175048764
 protein coding gene Chr7:93608519-93611967 (+)
C57BL/6NJ ENSMUSG00215048929
 protein coding gene Chr7:92877941-92881389 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030225
 protein coding gene Chr7:107761004-107764202 (+)
CAST/EiJ ENSTCUG00005052879
 protein coding gene Chr7:96277795-96281248 (+)
CBA/J ENSMUSG00210037672
 protein coding gene Chr7:93434013-93437461 (+)
DBA/2J ENSMUSG00185056820
 protein coding gene Chr7:97786418-97789866 (+)
FVB/NJ ENSMUSG00205037320
 protein coding gene Chr7:93420062-93423510 (+)
JF1/MsJ ENSUMUG00000048947
 protein coding gene Chr7:102842768-102846216 (+)
LP/J ENSMUSG00230042710
 protein coding gene Chr7:103888110-103891558 (+)
NOD/ShiLtJ ENSMUSG00190044767
 protein coding gene Chr7:93760454-93763907 (+)
NZO/HlLtJ ENSMUSG00225017380
 protein coding gene Chr7:102080508-102083956 (+)
PWK/PhJ ENSLUMG00010041073
 protein coding gene Chr7:91963048-91966498 (+)
SPRET/EiJ ENSMSPG00010033617
 protein coding gene Chr7:93169114-93172568 (+)
WSB/EiJ ENSIUOG00005049152
 protein coding gene Chr7:94008000-94011448 (+)



Homology
more
  • Human Ortholog
    C11orf42, chromosome 11 open reading frame 42
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C11orf42, chromosome 11 open reading frame 42
  • Links
    NCBI Gene ID: 160298
    UniProt: Q8N5U0

  • Chr Location
    11p15.4; chr11:6205557-6211135 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    3
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 100503879 NCBI Gene Model | MGI Sequence Detail 3340 C57BL/6J ±  kb
transcript NM_001329995 RefSeq | MGI Sequence Detail 1184 C57BL/6  
polypeptide NP_001369348 RefSeq | MGI Sequence Detail 334 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR031366 Protein of unknown function DUF4663
  • GlyGen
    D3YVJ1 1 site
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 22
    Gene Ontology 3
    Phenotypes 10
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory