Emx2os MGI Mouse Gene Detail - MGI:3052329 - Emx2 opposite strand/antisense transcript, non-protein coding

Sequence Map

Chr19:59413536-59447067 bp, - strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3052329	antisense lncRNA gene	Chr19:59383296-59448147 (-)
129S1/SvImJ	ENSMUSG00200015052	lncRNA gene	Chr19:56120935-56154644 (-)
A/J	ENSMUSG00195002598	lncRNA gene	Chr19:56293888-56327600 (-)
AKR/J	ENSMUSG00220018216	lncRNA gene	Chr19:56029881-56063625 (-)
BALB/cJ	ENSMUSG00180019934	lncRNA gene	Chr19:56519505-56553203 (-)
C3H/HeJ	ENSMUSG00175022416	lncRNA gene	Chr19:56063012-56096743 (-)
C57BL/6NJ	ENSMUSG00215026935	lncRNA gene	Chr19:56156898-56190432 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003108	antisense lncRNA gene	Chr19:55909274-55944364 (-)
CAST/EiJ	ENSTCUG00005015498	lncRNA gene	Chr19:55712974-55746697 (-)
CBA/J	ENSMUSG00210021736	lncRNA gene	Chr19:56143057-56176784 (-)
DBA/2J	ENSMUSG00185028920	lncRNA gene	Chr19:56638939-56672662 (-)
FVB/NJ	ENSMUSG00205003758	lncRNA gene	Chr19:55551505-55585211 (-)
JF1/MsJ	ENSUMUG00000040973	lncRNA gene	Chr19:56849937-56883526 (-)
LP/J	ENSMUSG00230027888	lncRNA gene	Chr19:57403323-57437030 (-)
NOD/ShiLtJ	ENSMUSG00190014027	lncRNA gene	Chr19:56087665-56121193 (-)
NZO/HlLtJ	ENSMUSG00225021031	lncRNA gene	Chr19:61028708-61062230 (-)
PWK/PhJ	ENSLUMG00010018679	lncRNA gene	Chr19:55904852-55938603 (-)
SPRET/EiJ	ENSMSPG00010003429	lncRNA gene	Chr19:55749028-55782809 (-)
WSB/EiJ	ENSIUOG00005025896	lncRNA gene	Chr19:55508260-55542003 (-)

Vertebrate Orthology Source

Alliance of Genome Resources

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	329078	NCBI Gene Model \| MGI Sequence Detail	33532	C57BL/6J	± kb
	transcript	NR_002863	RefSeq \| MGI Sequence Detail	5023	C57BL/6

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Summaries

All 14
Earliest

J:82004 Noonan FC, et al., Antisense transcripts at the EMX2 locus in human and mouse( small star, filled ). Genomics. 2003 Jan;81(1):58-66

TSS for Emx2os:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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