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Msantd5l Gene Detail
Summary
  • Symbol
    Msantd5l
  • Name
    Myb/SANT DNA binding domain containing 5 like
  • Synonyms
    BC049762
  • Feature Type
    protein coding gene
  • IDs
    MGI:3039622
    NCBI Gene: 193286
  • Alliance
    genome feature page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:51144478-51153873 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 31.02 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    312 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3039622
 protein coding gene Chr11:51144472-51154489 (-)
129S1/SvImJ ENSMUSG00200039682
 protein coding gene Chr11:48131436-48140831 (-)
A/J ENSMUSG00195031112
 protein coding gene Chr11:48074459-48083854 (-)
AKR/J ENSMUSG00220030749
 protein coding gene Chr11:48263308-48272703 (-)
BALB/cJ ENSMUSG00180029436
 protein coding gene Chr11:48135888-48145284 (-)
C3H/HeJ ENSMUSG00175035799
 protein coding gene Chr11:48105988-48115383 (-)
C57BL/6NJ ENSMUSG00215032028
 protein coding gene Chr11:48007378-48016773 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016307
 protein coding gene Chr11:46159953-46168693 (-)
CAST/EiJ ENSTCUG00005037824
 protein coding gene Chr11:47703118-47712477 (-)
CBA/J ENSMUSG00210028605
 protein coding gene Chr11:47961980-47971375 (-)
DBA/2J ENSMUSG00185025735
 protein coding gene Chr11:48171267-48180660 (-)
FVB/NJ ENSMUSG00205019411
 protein coding gene Chr11:48004320-48013716 (-)
JF1/MsJ ENSUMUG00000021986
 protein coding gene Chr11:48526331-48535738 (-)
LP/J ENSMUSG00230030362
 protein coding gene Chr11:49355219-49364614 (-)
NOD/ShiLtJ ENSMUSG00190032110
 protein coding gene Chr11:48235070-48244463 (-)
NZO/HlLtJ ENSMUSG00225030653
 protein coding gene Chr11:51383525-51392927 (-)
PWK/PhJ ENSLUMG00010030087
 protein coding gene Chr11:47993952-48003392 (-)
SPRET/EiJ ENSMSPG00010017800
 protein coding gene Chr11:48655037-48664431 (-)
WSB/EiJ ENSIUOG00005033822
 protein coding gene Chr11:48019874-48029267 (-)



Homology
more
  • Human Ortholog
    MSANTD5, Myb/SANT DNA binding domain containing 5
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MSANTD5, Myb/SANT DNA binding domain containing 5
  • Links
    NCBI Gene ID: 102724657
    UniProt: A0A3B3IT52

  • Chr Location
    chr5:178691534-178707472 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Gene trapped
    1
  • Targeted
    2
  • Genomic Mutations
    1 involving Msantd5l
  • Find Mice (IMSR)
    11 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    20
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000045942 Ensembl Gene Model | MGI Sequence Detail 9396 C57BL/6J ±  kb
transcript ENSMUST00000231433 Ensembl | MGI Sequence Detail 855 Not Applicable  
polypeptide ENSMUSP00000155926 Ensembl | MGI Sequence Detail 219 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
Molecular
Reagents
less
  • All nucleic 20
    cDNA 20

    Microarray probesets 2
Other
Accession IDs
less
MGI:7513914
References
more
  • Summaries
    All 27
    Phenotypes 9
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory