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Rsph4a Gene Detail
Summary
  • Symbol
    Rsph4a
  • Name
    radial spoke head 4 homolog A (Chlamydomonas)
  • Synonyms
    Rshl3
  • Feature Type
    protein coding gene
  • IDs
    MGI:3027894
    NCBI Gene: 212892
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:33781107-33792017 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 18.84 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    330 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3027894
 protein coding gene Chr10:33781107-33792017 (+)
129S1/SvImJ ENSMUSG00200008566
 protein coding gene Chr10:30625867-30636782 (+)
A/J ENSMUSG00195016053
 protein coding gene Chr10:30901984-30912895 (+)
AKR/J ENSMUSG00220026777
 protein coding gene Chr10:30599214-30610128 (+)
BALB/cJ ENSMUSG00180014880
 protein coding gene Chr10:31022010-31032921 (+)
C3H/HeJ ENSMUSG00175011549
 protein coding gene Chr10:30777020-30787932 (+)
C57BL/6NJ ENSMUSG00215007701
 protein coding gene Chr10:30566675-30577587 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015224
 protein coding gene Chr10:29735357-29746758 (+)
CAST/EiJ ENSTCUG00005028146
 protein coding gene Chr10:31015242-31026008 (+)
CBA/J ENSMUSG00210025166
 protein coding gene Chr10:30704408-30715318 (+)
DBA/2J ENSMUSG00185007330
 protein coding gene Chr10:30857229-30868141 (+)
FVB/NJ ENSMUSG00205012556
 protein coding gene Chr10:30838027-30848938 (+)
JF1/MsJ ENSUMUG00000033009
 protein coding gene Chr10:30615192-30626080 (+)
LP/J ENSMUSG00230014939
 protein coding gene Chr10:32622799-32633709 (+)
NOD/ShiLtJ ENSMUSG00190026855
 protein coding gene Chr10:30970248-30981154 (+)
NZO/HlLtJ ENSMUSG00225033066
 protein coding gene Chr10:36881152-36892062 (+)
PWK/PhJ ENSLUMG00010007323
 protein coding gene Chr10:30633392-30644262 (+)
SPRET/EiJ ENSMSPG00010020100
 protein coding gene Chr10:31577516-31588442 (+)
WSB/EiJ ENSIUOG00005014839
 protein coding gene Chr10:30404534-30415445 (+)



Homology
more
  • Human Ortholog
    RSPH4A, radial spoke head component 4A
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RSPH4A, radial spoke head component 4A
  • Synonyms
    CILD11, dJ412I7.1, RSHL3, RSPH6B
  • Links
    NCBI Gene ID: 345895
    UniProt: Q5TD94

  • Chr Location
    6q22.1; chr6:116616479-116632985 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with human RSPH4A associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    34
  • GO References
    13
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    631
  • Tissues
    6
  • cDNA Data
    8
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 212892 NCBI Gene Model | MGI Sequence Detail 10911 C57BL/6J ±  kb
transcript NM_001162957 RefSeq | MGI Sequence Detail 3650 C57BL/6  
polypeptide Q8BYM7 UniProt | EBI | MGI Sequence Detail 716 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 2
References
more
  • Summaries
    All 42
    Developmental Gene Expression 3
    Gene Ontology 13
    Phenotypes 12
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:391325 Fang A, et al., RGS22 is a metazoa-specific radial spoke component required for coordinated ciliary beating. Nat Commun. 2026 Jun 24;17(1)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory