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Pasd1 Gene Detail
Summary
  • Symbol
    Pasd1
  • Name
    PAS domain containing repressor 1
  • Synonyms
    Gm1141, LOC382221
Location &
Maps
more
  • Sequence Map
    ChrX:70976044-70984477 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 37.14 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    271 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685987
 protein coding gene ChrX:70964553-70984477 (+)
129S1/SvImJ ENSMUSG00200042890
 protein coding gene ChrX:53104694-53124632 (+)
A/J ENSMUSG00195034885
 protein coding gene ChrX:56732253-56752189 (+)
AKR/J ENSMUSG00220046307
 protein coding gene ChrX:52017184-52037114 (+)
BALB/cJ ENSMUSG00180048065
 protein coding gene ChrX:53319187-53339123 (+)
C3H/HeJ ENSMUSG00175029581
 protein coding gene ChrX:56888025-56907959 (+)
C57BL/6NJ ENSMUSG00215040096
 protein coding gene ChrX:53358600-53378529 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033134
 protein coding gene ChrX:67068669-67085328 (+)
CAST/EiJ ENSTCUG00005038712
 protein coding gene ChrX:54852909-54872905 (+)
CBA/J ENSMUSG00210044060
 protein coding gene ChrX:53560244-53580179 (+)
DBA/2J ENSMUSG00185031224
 protein coding gene ChrX:66002970-66022912 (+)
FVB/NJ ENSMUSG00205034515
 protein coding gene ChrX:53114392-53134331 (+)
JF1/MsJ ENSUMUG00000036662
 protein coding gene ChrX:86795804-86815768 (+)
LP/J ENSMUSG00230035786
 protein coding gene ChrX:72558813-72578747 (+)
NOD/ShiLtJ ENSMUSG00190040113
 protein coding gene ChrX:52814058-52833987 (+)
NZO/HlLtJ ENSMUSG00225047517
 protein coding gene ChrX:77763112-77783046 (+)
PWK/PhJ ENSLUMG00010040712
 protein coding gene ChrX:52668887-52688844 (+)
SPRET/EiJ ENSMSPG00010033826
 protein coding gene ChrX:55656004-55676552 (+)
WSB/EiJ ENSIUOG00005044531
 protein coding gene ChrX:53761792-53781772 (+)



Homology
more
  • Human Ortholog
    PASD1, PAS domain containing repressor 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PASD1, PAS domain containing repressor 1
  • Synonyms
    CT63, CT64, OXTES1
  • Links
    NCBI Gene ID: 139135
    UniProt: Q8IV76

  • Chr Location
    Xq28; chrX:151563675-151676739 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    14
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    7
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 382221 NCBI Gene Model | MGI Sequence Detail 8434 C57BL/6J ±  kb
transcript NR_027801 RefSeq | MGI Sequence Detail 2148 C57BL/6  
polypeptide J9JI72 UniProt | EBI | MGI Sequence Detail 758 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR047230 Circadian locomoter output cycles protein kaput-like
    IPR000014 PAS domain
    IPR035965 PAS domain superfamily
  • GlyGen
    J9JI72 2 sites
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 1
Other
Accession IDs
less
MGI:7516782
References
more
  • Summaries
    All 21
    Gene Ontology 4
    Phenotypes 3
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory