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Mir200a Gene Detail
Summary
  • Symbol
    Mir200a
  • Name
    microRNA 200a
  • Synonyms
    Mirn200a, mmu-mir-200a
Location &
Maps
more
  • Sequence Map
    Chr4:156139353-156139442 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 87.96 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    142 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2676874
 miRNA gene Chr4:156139353-156139442 (-)
129S1/SvImJ ENSMUSG00200019886
 miRNA gene Chr4:147181475-147181564 (-)
A/J ENSMUSG00195021091
 miRNA gene Chr4:148847613-148847702 (-)
AKR/J ENSMUSG00220027898
 miRNA gene Chr4:148422947-148423036 (-)
BALB/cJ ENSMUSG00180002657
 miRNA gene Chr4:146502152-146502241 (-)
C3H/HeJ ENSMUSG00175020170
 miRNA gene Chr4:149802759-149802848 (-)
C57BL/6NJ ENSMUSG00215026810
 miRNA gene Chr4:148662493-148662582 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0007927
 miRNA gene Chr4:145944400-145944489 (-)
CAST/EiJ ENSTCUG00005035749
 miRNA gene Chr4:152500882-152500971 (-)
CBA/J ENSMUSG00210006024
 miRNA gene Chr4:148461125-148461214 (-)
DBA/2J ENSMUSG00185017063
 miRNA gene Chr4:152018661-152018750 (-)
FVB/NJ ENSMUSG00205022811
 miRNA gene Chr4:146923508-146923597 (-)
JF1/MsJ ENSUMUG00000000400
 miRNA gene Chr4:155063325-155063414 (-)
LP/J ENSMUSG00230026273
 miRNA gene Chr4:158769253-158769342 (-)
NOD/ShiLtJ ENSMUSG00190004189
 miRNA gene Chr4:148127125-148127214 (-)
NZO/HlLtJ ENSMUSG00225024695
 miRNA gene Chr4:162741291-162741380 (-)
PWK/PhJ ENSLUMG00010028076
 miRNA gene Chr4:147314788-147314877 (-)
SPRET/EiJ ENSMSPG00010024896
 miRNA gene Chr4:149248976-149249065 (-)
WSB/EiJ ENSIUOG00005006851
 miRNA gene Chr4:146336057-146336146 (-)



Homology
more
  • Human Ortholog
    MIR200A, microRNA 200a
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MIR200A, microRNA 200a
  • Synonyms
    mir-200a, MIRN200A
  • Links
    NCBI Gene ID: 406983

  • Chr Location
    chr1:1167863-1167952 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    12
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    629
  • Tissues
    17
  • Literature Summary
    21
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 387242 NCBI Gene Model | MGI Sequence Detail 90 C57BL/6J ±  kb
transcript NR_029723 RefSeq | MGI Sequence Detail 90 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 8
    Primer pair 5
    Other 3
Other Database
Links
less
miRBase MI0000554
References
more
  • Summaries
    All 65
    Developmental Gene Expression 21
    Gene Ontology 8
    Phenotypes 5
  • Earliest
    J:84908 Lagos-Quintana M, et al., New microRNAs from mouse and human. RNA. 2003 Feb;9(2):175-9
  • Latest
    J:370516 Leonard R, et al., Single-nuclei multiomics analysis identifies abnormal cardiomyocytes in a murine model of cardiac development. Nat Commun. 2025 Jul 29;16(1):6947
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory